CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000317950
(
Malus domestica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
MDP0000317950
T009105_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
A5JTT1_WHEAT
M09700_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF3_01
0.717
0.729
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.706
0.812
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.706
0.812
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.706
0.812
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000317950
AP2
128
180
QHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETAEGAALAYDQAAFKIRGX
Links
Other
AP2
family TFs
Other
Malus domestica
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30174.m008755
Ricinus communis
30174.m008755
I
0.726
30174.m008756
Ricinus communis
30174.m008756
I
0.694
30174.m008759
Ricinus communis
30174.m008759
I
0.684
A5JTT1_WHEAT
Triticum aestivum
A5JTT1_WHEAT
D
0.717
ERF13
Arabidopsis thaliana
AT2G44840
D
0.706
Bo4g024140
Brassica oleracea
Bo4g024140
I
0.706
Bo4g195220
Brassica oleracea
Bo4g195220
I
0.706
Bo9g001020
Brassica oleracea
Bo9g001020
I
0.677
Bostr.14547s0008
Boechera stricta
Bostr.14547s0008
I
0.686
Bra004873
Brassica rapa
Bra004873
I
0.706
Bra037630
Brassica rapa
Bra037630
I
0.706
Cagra.0239s0035
Capsella grandiflora
Cagra.0239s0035
I
0.706
Cagra.4714s0001
Capsella grandiflora
Cagra.4714s0001
I
0.685
Carubv10005868m.g
Capsella rubella
Carubv10005868m.g
I
0.685
Carubv10023967m.g
Capsella rubella
Carubv10023967m.g
I
0.706
cassava19881.m1
Manihot esculenta
cassava19881.m1
I
0.710
cassava19882.m1
Manihot esculenta
cassava19882.m1
I
0.706
cassava19883.m1
Manihot esculenta
cassava19883.m1
I
0.711
cassava6588.valid.m1
Manihot esculenta
cassava6588.valid.m1
I
0.682
Ca_02325
Cicer arietinum
Ca_02325
I
0.680
Ca_06034
Cicer arietinum
Ca_06034
I
0.683
Ca_17211
Cicer arietinum
Ca_17211
I
0.712
chr3.CM0080.200.nd
Lotus japonicus
chr3.CM0080.200.nd
I
0.716
chr3.CM0080.270.nc
Lotus japonicus
chr3.CM0080.270.nc
I
0.687
Ciclev10021132m.g
Citrus clementina
Ciclev10021132m.g
I
0.756
Ciclev10022025m.g
Citrus clementina
Ciclev10022025m.g
I
0.779
Ciclev10022734m.g
Citrus clementina
Ciclev10022734m.g
I
0.696
Cla021383
Citrullus lanatus
Cla021383
I
0.682
Cucsa.255330
Cucumis sativus
Cucsa.255330
I
0.696
Eucgr.E01571
Eucalyptus grandis
Eucgr.E01571
I
0.694
Eucgr.G00002
Eucalyptus grandis
Eucgr.G00002
I
0.717
Eucgr.G00388
Eucalyptus grandis
Eucgr.G00388
I
0.698
Eucgr.G00390
Eucalyptus grandis
Eucgr.G00390
I
0.751
Eucgr.G00391
Eucalyptus grandis
Eucgr.G00391
I
0.751
Eucgr.G00392
Eucalyptus grandis
Eucgr.G00392
I
0.708
Eucgr.G00393
Eucalyptus grandis
Eucgr.G00393
I
0.720
Eucgr.G00394
Eucalyptus grandis
Eucgr.G00394
I
0.720
Eucgr.G00396
Eucalyptus grandis
Eucgr.G00396
I
0.720
Eucgr.G00397
Eucalyptus grandis
Eucgr.G00397
I
0.742
Eucgr.G00943
Eucalyptus grandis
Eucgr.G00943
I
0.691
evm.TU.supercontig_101.15
Carica papaya
evm.TU.supercontig_101.15
I
0.715
gene04913-v1.0-hybrid
Fragaria vesca
gene04913-v1.0-hybrid
I
0.727
gene04916-v1.0-hybrid
Fragaria vesca
gene04916-v1.0-hybrid
I
0.703
gene04917-v1.0-hybrid
Fragaria vesca
gene04917-v1.0-hybrid
I
0.745
gene21165-v1.0-hybrid
Fragaria vesca
gene21165-v1.0-hybrid
I
0.681
GLYMA03G26437
Glycine max
GLYMA03G26437
I
0.693
GLYMA03G26520
Glycine max
GLYMA03G26520
I
0.706
GLYMA09G37780
Glycine max
GLYMA09G37780
I
0.721
GLYMA18G48730
Glycine max
GLYMA18G48730
I
0.721
Gorai.004G070500
Gossypium raimondii
Gorai.004G070500
I
0.767
Gorai.004G070600
Gossypium raimondii
Gorai.004G070600
I
0.780
Gorai.004G070700
Gossypium raimondii
Gorai.004G070700
I
0.691
Gorai.004G070800
Gossypium raimondii
Gorai.004G070800
I
0.767
Gorai.004G165800
Gossypium raimondii
Gorai.004G165800
I
0.694
Gorai.007G086000
Gossypium raimondii
Gorai.007G086000
I
0.734
Gorai.008G108400
Gossypium raimondii
Gorai.008G108400
I
0.698
Gorai.008G108500
Gossypium raimondii
Gorai.008G108500
I
0.678
gw1.105.71.1
Physcomitrella patens
gw1.105.71.1
I
0.710
Lus10016210.g
Linum usitatissimum
Lus10016210.g
I
0.685
Lus10029331.g
Linum usitatissimum
Lus10029331.g
I
0.681
Lus10042907.g
Linum usitatissimum
Lus10042907.g
I
0.684
MDP0000122665
Malus domestica
MDP0000122665
I
0.703
MDP0000133485
Malus domestica
MDP0000133485
I
0.831
MDP0000135205
Malus domestica
MDP0000135205
I
0.703
MDP0000153445
Malus domestica
MDP0000153445
I
0.840
MDP0000178398
Malus domestica
MDP0000178398
I
0.678
MDP0000189033
Malus domestica
MDP0000189033
I
0.831
MDP0000907929
Malus domestica
MDP0000907929
I
0.831
mgf023779m
Mimulus guttatus
mgf023779m
I
0.693
MLOC_51143
Hordeum vulgare
MLOC_51143
I
0.682
MTR_7g081795
Medicago truncatula
MTR_7g081795
I
0.678
MTR_8g006815
Medicago truncatula
MTR_8g006815
I
0.684
MTR_8g006825
Medicago truncatula
MTR_8g006825
I
0.711
MTR_8g006840
Medicago truncatula
MTR_8g006840
I
0.713
orange1.1g032263m.g
Citrus sinensis
orange1.1g032263m.g
I
0.696
orange1.1g039729m.g
Citrus sinensis
orange1.1g039729m.g
I
0.711
orange1.1g044584m.g
Citrus sinensis
orange1.1g044584m.g
I
0.711
orange1.1g047100m.g
Citrus sinensis
orange1.1g047100m.g
I
0.779
Pm017696
Prunus mume
Pm017696
I
0.743
Pm017698
Prunus mume
Pm017698
I
0.702
Pm017699
Prunus mume
Pm017699
I
0.733
Pm017700
Prunus mume
Pm017700
I
0.709
POPTR_0011s06010
Populus trichocarpa
POPTR_0011s06010
I
0.681
POPTR_0014s04600
Populus trichocarpa
POPTR_0014s04600
I
0.709
POPTR_0014s04610
Populus trichocarpa
POPTR_0014s04610
I
0.711
POPTR_0014s04630
Populus trichocarpa
POPTR_0014s04630
I
0.703
POPTR_0014s04640
Populus trichocarpa
POPTR_0014s04640
I
0.736
PRUPE_ppa016903mg
Prunus persica
PRUPE_ppa016903mg
I
0.743
PRUPE_ppa023698mg
Prunus persica
PRUPE_ppa023698mg
I
0.702
PRUPE_ppa025748mg
Prunus persica
PRUPE_ppa025748mg
I
0.717
PRUPE_ppb014367mg
Prunus persica
PRUPE_ppb014367mg
I
0.743
SapurV1A.0124s0170
Salix purpurea
SapurV1A.0124s0170
I
0.736
ATERF13
Arabidopsis lyrata
scaffold_403422.1
I
0.706
scaffold_604310.1
Arabidopsis lyrata
scaffold_604310.1
I
0.695
TCM_005705
Theobroma cacao
TCM_005705
I
0.716
TCM_005706
Theobroma cacao
TCM_005706
I
0.742
TCM_005707
Theobroma cacao
TCM_005707
I
0.746
Thhalv10001758m.g
Eutrema salsugineum
Thhalv10001758m.g
I
0.706
Thhalv10029212m.g
Eutrema salsugineum
Thhalv10029212m.g
I
0.681
Traes_2AS_72E9B68D2
Triticum aestivum
Traes_2AS_72E9B68D2
I
0.682
Traes_2BS_5E7287209
Triticum aestivum
Traes_2BS_5E7287209
I
0.682
VIT_15s0021g01590
Vitis vinifera
VIT_15s0021g01590
I
0.677
VIT_15s0021g01600
Vitis vinifera
VIT_15s0021g01600
I
0.677
VIT_15s0021g01610
Vitis vinifera
VIT_15s0021g01610
I
0.677