MDP0000317950 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000317950 T009105_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.717 0.729
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.706 0.812
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.706 0.812
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.706 0.812
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000317950 AP2 128 180

Links

Other AP2 family TFs
Other Malus domestica TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008755 Ricinus communis 30174.m008755 I 0.726
30174.m008756 Ricinus communis 30174.m008756 I 0.694
30174.m008759 Ricinus communis 30174.m008759 I 0.684
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.717
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.706
Bo4g024140 Brassica oleracea Bo4g024140 I 0.706
Bo4g195220 Brassica oleracea Bo4g195220 I 0.706
Bo9g001020 Brassica oleracea Bo9g001020 I 0.677
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.686
Bra004873 Brassica rapa Bra004873 I 0.706
Bra037630 Brassica rapa Bra037630 I 0.706
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.706
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.685
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.685
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.706
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.710
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.706
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.711
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.682
Ca_02325 Cicer arietinum Ca_02325 I 0.680
Ca_06034 Cicer arietinum Ca_06034 I 0.683
Ca_17211 Cicer arietinum Ca_17211 I 0.712
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.716
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.687
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.756
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.779
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.696
Cla021383 Citrullus lanatus Cla021383 I 0.682
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.696
ERF13 Arabidopsis thaliana AT2G44840 D 0.706
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.694
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.717
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.698
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.751
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.751
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.708
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.720
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.720
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.720
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.742
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.691
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.715
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.727
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.703
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.745
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.681
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.693
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.706
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.721
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.721
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.767
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.780
Gorai.004G070700 Gossypium raimondii Gorai.004G070700 I 0.691
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.767
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.694
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.734
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I 0.698
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.678
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.710
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.685
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.681
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.684
MDP0000122665 Malus domestica MDP0000122665 I 0.703
MDP0000133485 Malus domestica MDP0000133485 I 0.831
MDP0000135205 Malus domestica MDP0000135205 I 0.703
MDP0000153445 Malus domestica MDP0000153445 I 0.840
MDP0000178398 Malus domestica MDP0000178398 I 0.678
MDP0000189033 Malus domestica MDP0000189033 I 0.831
MDP0000907929 Malus domestica MDP0000907929 I 0.831
mgf023779m Mimulus guttatus mgf023779m I 0.693
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.682
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.678
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.684
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.711
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.713
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.696
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.711
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.711
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.779
Pm017696 Prunus mume Pm017696 I 0.743
Pm017698 Prunus mume Pm017698 I 0.702
Pm017699 Prunus mume Pm017699 I 0.733
Pm017700 Prunus mume Pm017700 I 0.709
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.681
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.709
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.711
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.703
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.736
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.743
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.702
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.717
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.743
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.736
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.695
TCM_005705 Theobroma cacao TCM_005705 I 0.716
TCM_005706 Theobroma cacao TCM_005706 I 0.742
TCM_005707 Theobroma cacao TCM_005707 I 0.746
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.706
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.681
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.682
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.682
VIT_15s0021g01590 Vitis vinifera VIT_15s0021g01590 I 0.677
VIT_15s0021g01600 Vitis vinifera VIT_15s0021g01600 I 0.677
VIT_15s0021g01610 Vitis vinifera VIT_15s0021g01610 I 0.677