CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g010763m.g
(
Citrus sinensis
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
orange1.1g010763m.g
T009208_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.812
0.929
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.811
0.939
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.794
0.908
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.770
0.827
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g010763m
AP2
177
226
SQYRGVTFYRRTSRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRG
orange1.1g010763m
AP2
269
320
SKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDNEAEAARAYDKAAIKQNGR
orange1.1g011372m
AP2
177
226
SQYRGVTFYRRTSRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRG
orange1.1g011372m
AP2
269
316
SKYRGVTLHKCGRWEARMGQLLGKKAYDKAAIKQNGREALTNFEPSAY
orange1.1g014099m
AP2
177
226
SQYRGVTFYRRTSRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRG
orange1.1g014099m
AP2
269
320
SKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDNEAEAARAYDKAAIKQNGR
orange1.1g021606m
AP2
177
226
SQYRGVTFYRRTSRWESHIWDCGKQVYLGGFDTAHSAARAYDRAAIKFRG
orange1.1g021606m
AP2
269
309
SKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDNEAEAARS
Links
Other
AP2
family TFs
Other
Citrus sinensis
TFs
239 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy