Pavir.Ba03296 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ba03296 T009368_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba03296.1.p AP2 81 132

Links

Other AP2 family TFs
Other Panicum virgatum TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Da00220 Panicum virgatum Pavir.Da00220 I 0.767
BRADI2G31480 Brachypodium distachyon BRADI2G31480 I 0.729
GSMUA_Achr5G27850_001 Musa acuminata GSMUA_Achr5G27850_001 I 0.722
GSMUA_Achr8G01690_001 Musa acuminata GSMUA_Achr8G01690_001 I 0.713
GSMUA_Achr11G19880_001 Musa acuminata GSMUA_Achr11G19880_001 I 0.712
MLOC_40486 Hordeum vulgare MLOC_40486 I 0.710
GSMUA_Achr4G16600_001 Musa acuminata GSMUA_Achr4G16600_001 I 0.707
Carubv10028227m.g Capsella rubella Carubv10028227m.g I 0.704
GRMZM2G171569 Zea mays GRMZM2G171569 I 0.703
LPERR03G32900 Leersia perrieri LPERR03G32900 I 0.698
GSMUA_Achr10G01110_001 Musa acuminata GSMUA_Achr10G01110_001 I 0.697
GSMUA_Achr6G14240_001 Musa acuminata GSMUA_Achr6G14240_001 I 0.697
Pavir.J26710 Panicum virgatum Pavir.J26710 I 0.696
GSMUA_Achr7G21980_001 Musa acuminata GSMUA_Achr7G21980_001 I 0.694
Bo8g118250 Brassica oleracea Bo8g118250 I 0.693
Bra032665 Brassica rapa Bra032665 I 0.693
Sb02g006780 Sorghum bicolor Sb02g006780 I 0.693
Sb05g001280 Sorghum bicolor Sb05g001280 I 0.692
MLOC_58641 Hordeum vulgare MLOC_58641 I 0.691
TRAES3BF017100030CFD_g Triticum aestivum TRAES3BF017100030CFD_g I 0.691
GRMZM2G044077 Zea mays GRMZM2G044077 I 0.690
GSMUA_Achr9G28840_001 Musa acuminata GSMUA_Achr9G28840_001 I 0.690
Ciclev10002183m.g Citrus clementina Ciclev10002183m.g I 0.689
orange1.1g043400m.g Citrus sinensis orange1.1g043400m.g I 0.689
BGIOSGA009571 Oryza indica BGIOSGA009571 I 0.688
BRADI2G07357 Brachypodium distachyon BRADI2G07357 I 0.688
OBART03G38710 Oryza barthii OBART03G38710 I 0.688
OGLUM03G38530 Oryza glumaepatula OGLUM03G38530 I 0.688
OMERI03G35630 Oryza meridionalis OMERI03G35630 I 0.688
ONIVA03G40360 Oryza nivara ONIVA03G40360 I 0.688
ORGLA03G0354400 Oryza glaberrima ORGLA03G0354400 I 0.688
ORUFI03G40350 Oryza rufipogon ORUFI03G40350 I 0.688
OS03G0815800 Oryza sativa OS03G0815800 I 0.688
GRMZM2G142179 Zea mays GRMZM2G142179 I 0.687
GSMUA_Achr10G14570_001 Musa acuminata GSMUA_Achr10G14570_001 I 0.687
LPERR01G07340 Leersia perrieri LPERR01G07340 I 0.687
OGLUM01G08910 Oryza glumaepatula OGLUM01G08910 I 0.687
OMERI01G07770 Oryza meridionalis OMERI01G07770 I 0.687
ONIVA01G10020 Oryza nivara ONIVA01G10020 I 0.687
OPUNC01G07600 Oryza punctata OPUNC01G07600 I 0.687
ORGLA01G0069400 Oryza glaberrima ORGLA01G0069400 I 0.687
ORUFI01G08530 Oryza rufipogon ORUFI01G08530 I 0.687
OS01G0224100 Oryza sativa OS01G0224100 I 0.687
Sb03g001296 Sorghum bicolor Sb03g001296 I 0.687
Si002247m.g Setaria italica Si002247m.g I 0.686
Pavir.Ea00119 Panicum virgatum Pavir.Ea00119 I 0.686
Pavir.Eb00092 Panicum virgatum Pavir.Eb00092 I 0.686
OPUNC03G35790 Oryza punctata OPUNC03G35790 I 0.685
GRMZM2G328197 Zea mays GRMZM2G328197 I 0.684
Pavir.J13096 Panicum virgatum Pavir.J13096 I 0.684
TRIUR3_07811 Triticum urartu TRIUR3_07811 I 0.682
Cucsa.201950 Cucumis sativus Cucsa.201950 I 0.682
Pavir.J24236 Panicum virgatum Pavir.J24236 I 0.682
Pavir.J29117 Panicum virgatum Pavir.J29117 I 0.682
Bra004548 Brassica rapa Bra004548 I 0.681
Cla021505 Citrullus lanatus Cla021505 I 0.681
Cucsa.258900 Cucumis sativus Cucsa.258900 I 0.681
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.681
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.681
Lus10005281.g Linum usitatissimum Lus10005281.g I 0.680
Lus10013958.g Linum usitatissimum Lus10013958.g I 0.680
Pavir.J11205 Panicum virgatum Pavir.J11205 I 0.680
Bo4g009400 Brassica oleracea Bo4g009400 I 0.679
GRMZM2G429378 Zea mays GRMZM2G429378 I 0.679
F775_13439 Aegilops tauschii F775_13439 I 0.678
MDP0000190504 Malus domestica MDP0000190504 I 0.678
Pavir.Db02131 Panicum virgatum Pavir.Db02131 I 0.677