Pavir.Hb01232 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Hb01232 T009494_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Hb01232.1.p AP2 141 193

Links

Other AP2 family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si027485m.g Setaria italica Si027485m.g I 0.715
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.715
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.715
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.711
Si028088m.g Setaria italica Si028088m.g I 0.704
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.703
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.703
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.703
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.702
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.692
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.692
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.691
Gorai.006G250100 Gossypium raimondii Gorai.006G250100 N 0.689
LPERR06G03670 Leersia perrieri LPERR06G03670 N 0.684
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.683
Gorai.006G250000 Gossypium raimondii Gorai.006G250000 N 0.682
e_gw1.2.353.1 Physcomitrella patens e_gw1.2.353.1 N 0.679