Pavir.Ib00527 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ib00527 T009525_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib00527.1.p AP2 70 121

Links

Other AP2 family TFs
Other Panicum virgatum TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.814
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.798
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.773
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.767
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.767
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.767
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.767
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.737
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.728
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.728
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.727
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.727
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.725
OBART07G26160 Oryza barthii OBART07G26160 N 0.725
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.725
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.725
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.725
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.725
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.725
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.725
OS07G0674800 Oryza sativa OS07G0674800 N 0.725
Si031079m.g Setaria italica Si031079m.g I 0.725
Si036118m.g Setaria italica Si036118m.g I 0.725
Si036821m.g Setaria italica Si036821m.g N 0.725
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.725
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.725
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.721
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.721
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.721
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.721
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.721
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.721
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.721
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.721
OS03G0341000 Oryza sativa OS03G0341000 N 0.721
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.717
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.716
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.716
OBART03G06100 Oryza barthii OBART03G06100 I 0.716
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.716
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.716
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.716
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.716
OS03G0183300 Oryza sativa OS03G0183300 I 0.716
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.711
LPERR03G05410 Leersia perrieri LPERR03G05410 N 0.707
Bra021594 Brassica rapa Bra021594 I 0.704
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.701
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.699
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.698
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.696
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.696
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.696
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.696
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.696
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.696
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.696
OS01G0313300 Oryza sativa OS01G0313300 I 0.696
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.696
Si002845m.g Setaria italica Si002845m.g I 0.696
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.696
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.696
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.696
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.696
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.696
BGIOSGA032849 Oryza indica BGIOSGA032849 I 0.695
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.695
OGLUM10G08400 Oryza glumaepatula OGLUM10G08400 I 0.695
OMERI10G05820 Oryza meridionalis OMERI10G05820 I 0.695
ONIVA10G08250 Oryza nivara ONIVA10G08250 I 0.695
ORGLA10G0072500 Oryza glaberrima ORGLA10G0072500 I 0.695
ORUFI10G09060 Oryza rufipogon ORUFI10G09060 I 0.695
OS10G0390800 Oryza sativa OS10G0390800 I 0.695
MDP0000322279 Malus domestica MDP0000322279 I 0.693
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.692
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.692
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.691
TCM_026233 Theobroma cacao TCM_026233 I 0.689
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.689
GRMZM2G114820 Zea mays GRMZM2G114820 I 0.688
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.688
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.688
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.688
Lus10005805.g Linum usitatissimum Lus10005805.g I 0.687
Lus10006796.g Linum usitatissimum Lus10006796.g I 0.687
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.686
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.686
GSMUA_Achr10G09560_001 Musa acuminata GSMUA_Achr10G09560_001 I 0.685
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.684
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.684
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.684
mgf018693m Mimulus guttatus mgf018693m I 0.683
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.682
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.682
Bo1g129710 Brassica oleracea Bo1g129710 I 0.681
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.681
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.681
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.681
Ca_07754 Cicer arietinum Ca_07754 I 0.681
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.681
MLOC_51143 Hordeum vulgare MLOC_51143 I 0.680
Traes_2AS_72E9B68D2 Triticum aestivum Traes_2AS_72E9B68D2 I 0.680
Traes_2BS_5E7287209 Triticum aestivum Traes_2BS_5E7287209 I 0.680
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.679
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.679
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.679
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.679
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.679
OS04G0669200 Oryza sativa OS04G0669200 I 0.679
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.679
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.679
GSMUA_Achr10G19950_001 Musa acuminata GSMUA_Achr10G19950_001 I 0.678
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.677
GSMUA_Achr10G31090_001 Musa acuminata GSMUA_Achr10G31090_001 I 0.677
Si032815m.g Setaria italica Si032815m.g I 0.677
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.677