chr1.CM0295.160.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0295.160.nd T010145_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.720 0.812
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.700 0.750
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0295.160.nd AP2 79 130

Links

Other AP2 family TFs
Other Lotus japonicus TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g096780 Medicago truncatula MTR_7g096780 I 0.790
Ca_12219 Cicer arietinum Ca_12219 I 0.790
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.762
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.744
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.744
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.744
Ca_07754 Cicer arietinum Ca_07754 I 0.744
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.744
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.736
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.736
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.732
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.732
mgf023600m Mimulus guttatus mgf023600m I 0.732
mgf022372m Mimulus guttatus mgf022372m I 0.726
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.725
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.723
29680.m001678 Ricinus communis 29680.m001678 I 0.723
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.723
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.723
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.722
mgf018693m Mimulus guttatus mgf018693m I 0.722
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.722
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.722
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.722
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.722
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.720
F775_22020 Aegilops tauschii F775_22020 I 0.715
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.715
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.715
Ca_12221 Cicer arietinum Ca_12221 I 0.715
F775_52314 Aegilops tauschii F775_52314 I 0.711
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.711
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.711
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.711
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.711
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.708
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.708
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.708
F775_25471 Aegilops tauschii F775_25471 I 0.707
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.707
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.707
Si038911m.g Setaria italica Si038911m.g I 0.707
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.707
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.707
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.707
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.706
MDP0000246808 Malus domestica MDP0000246808 I 0.706
MDP0000447570 Malus domestica MDP0000447570 I 0.706
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.705
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.705
TCM_004056 Theobroma cacao TCM_004056 I 0.705
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.705
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.705
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.705
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.705
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.704
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.704
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.703
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.703
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.703
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.703
TCM_026233 Theobroma cacao TCM_026233 I 0.703
TCM_026234 Theobroma cacao TCM_026234 I 0.703
29584.m000234 Ricinus communis 29584.m000234 I 0.703
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.703
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.703
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.703
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.703
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.703
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.703
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.703
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.702
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.701
ERF094 Arabidopsis thaliana AT1G06160 D 0.700
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.700
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.700
MDP0000322279 Malus domestica MDP0000322279 I 0.699
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.698
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.698
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.698
Ca_12081 Cicer arietinum Ca_12081 I 0.698
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.698
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.696
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.696
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.696
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.696
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.696
POPTR_0002s04010 Populus trichocarpa POPTR_0002s04010 I 0.694
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.694
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.694
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.692
F775_22331 Aegilops tauschii F775_22331 I 0.691
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.691
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.691
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.690
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.690
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.690
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.690
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.690
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.690
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.689
Bra032433 Brassica rapa Bra032433 I 0.688
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.688
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.687
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.686
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.686
Pm020604 Prunus mume Pm020604 I 0.686
MDP0000855671 Malus domestica MDP0000855671 I 0.686
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.685
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.685
TCM_020871 Theobroma cacao TCM_020871 I 0.685
Traes_1BL_8E4911A3C Triticum aestivum Traes_1BL_8E4911A3C I 0.685
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.685
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.685
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.685
Cla006080 Citrullus lanatus Cla006080 I 0.685
Cla007697 Citrullus lanatus Cla007697 I 0.685
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.685
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.685
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.685
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.685
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.685
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.685
GSMUA_Achr2G17810_001 Musa acuminata GSMUA_Achr2G17810_001 I 0.684
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.684
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.684
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.683
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.683
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.683
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.683
TCM_004052 Theobroma cacao TCM_004052 I 0.683
Ca_23170 Cicer arietinum Ca_23170 I 0.683
Pm009382 Prunus mume Pm009382 I 0.683
29895.m000321 Ricinus communis 29895.m000321 I 0.683
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.683
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.683
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.683
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.683
MDP0000127134 Malus domestica MDP0000127134 I 0.683
MDP0000167207 Malus domestica MDP0000167207 I 0.683
MDP0000235313 Malus domestica MDP0000235313 I 0.683
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.683
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.682
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.682
Cla021850 Citrullus lanatus Cla021850 I 0.682
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.682
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.682
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.682
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.681
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.681
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.680
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.680
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.680
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.680
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.680
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.680
BRADI3G27690 Brachypodium distachyon BRADI3G27690 I 0.679
F775_01857 Aegilops tauschii F775_01857 I 0.679
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.679
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.679
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.679
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.679
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.678
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.678
Si033089m.g Setaria italica Si033089m.g I 0.678
Lus10027469.g Linum usitatissimum Lus10027469.g I 0.678
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.677
Si032815m.g Setaria italica Si032815m.g I 0.677
VIT_07s0031g00710 Vitis vinifera VIT_07s0031g00710 I 0.677