CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_209560
(
Trichomonas vaginalis
)
APSES
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04383 (KilA-N)
IPR018004
TVAG_209560
T012959_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
XBP1
M00005_2.00
Saccharomyces cerevisiae
NCTCGARN
NYTCGAGN
PBM
Badis et al.(2008)
XBP1_4495
0.660
0.030
XBP1
M01515_2.00
Saccharomyces cerevisiae
NNYTCGR
YCGARNN
PBM
Zhu et al.(2009)
Xbp1
0.660
0.030
XBP1
M07436_2.00
Saccharomyces cerevisiae
YTCGARN
NYTCGAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0414.1
0.660
0.030
XBP1
M08474_2.00
Saccharomyces cerevisiae
VNCTCGARGMNR
YNKCYTCGAGNB
Misc
DeBoer et al.(2011)
YIL101C_2039
0.660
0.030
XBP1
M09764_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$XBP1_03
0.660
0.030
XBP1
M09765_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$XBP1_Q2
0.660
0.030
For this family, TFs with SR scores >
0.650
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_209560
APSES
1
33
MYVDPRLVNYIAMWASPKYCIAVGKIMDSIDKK
Links
Other
APSES
family TFs
Other
Trichomonas vaginalis
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF024
Arabidopsis thaliana
AT2G36450
D
Bo3g030140
Brassica oleracea
Bo3g030140
I
Bo4g034600
Brassica oleracea
Bo4g034600
I
Bo4g186300
Brassica oleracea
Bo4g186300
I
Bostr.23794s0446
Boechera stricta
Bostr.23794s0446
I
Bra017235
Brassica rapa
Bra017235
I
Bra023070
Brassica rapa
Bra023070
I
Cagra.0228s0035
Capsella grandiflora
Cagra.0228s0035
I
Carubv10024954m.g
Capsella rubella
Carubv10024954m.g
I
PGSC0003DMG400045042
Solanum tuberosum
PGSC0003DMG400045042
I
Solyc10g083560.1
Solanum lycopersicum
Solyc10g083560.1
I
Thhalv10017537m.g
Eutrema salsugineum
Thhalv10017537m.g
I