TVAG_209560 (Trichomonas vaginalis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 TVAG_209560 T012959_2.00 EuPathDB (2015-Mar-30)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
XBP1
M00005_2.00
Saccharomyces cerevisiae
NCTCGARN

NYTCGAGN
PBM
Badis et al.(2008)
XBP1_4495
0.660 0.030
XBP1
M01515_2.00
Saccharomyces cerevisiae
NNYTCGR

YCGARNN
PBM
Zhu et al.(2009)
Xbp1
0.660 0.030
XBP1
M07436_2.00
Saccharomyces cerevisiae
YTCGARN

NYTCGAR
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0414.1
0.660 0.030
XBP1
M08474_2.00
Saccharomyces cerevisiae
VNCTCGARGMNR

YNKCYTCGAGNB
Misc
DeBoer et al.(2011)
YIL101C_2039
0.660 0.030
XBP1
M09764_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$XBP1_03
0.660 0.030
XBP1
M09765_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$XBP1_Q2
0.660 0.030
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TVAG_209560 APSES 1 33

Links

Other APSES family TFs
Other Trichomonas vaginalis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ERF024 Arabidopsis thaliana AT2G36450 D
Bo3g030140 Brassica oleracea Bo3g030140 I
Bo4g034600 Brassica oleracea Bo4g034600 I
Bo4g186300 Brassica oleracea Bo4g186300 I
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I
Bra017235 Brassica rapa Bra017235 I
Bra023070 Brassica rapa Bra023070 I
Cagra.0228s0035 Capsella grandiflora Cagra.0228s0035 I
Carubv10024954m.g Capsella rubella Carubv10024954m.g I
PGSC0003DMG400045042 Solanum tuberosum PGSC0003DMG400045042 I
Solyc10g083560.1 Solanum lycopersicum Solyc10g083560.1 I
Thhalv10017537m.g Eutrema salsugineum Thhalv10017537m.g I