CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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kdm5ba
(
Gasterosteus aculeatus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSGACG00000000508
T014548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000000654
ARID/BRIGHT
82
166
VKLNFLDQIAKFWEFQGCTLKIPHVERKILDLYQLNKLVNEEGGFDAVCRERRWTRISVKMGFAPGKAIGSHLRAHYERILFPYN
Links
Other
ARID/BRIGHT
family TFs
Other
Gasterosteus aculeatus
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
kdm5ba
Oryzias latipes
ENSORLG00000014767
N
0.785
ENSPFOG00000015221
Poecilia formosa
ENSPFOG00000015221
N
0.763
ENSXMAG00000003378
Xiphophorus maculatus
ENSXMAG00000003378
N
0.763
ENSGMOG00000001476
Gadus morhua
ENSGMOG00000001476
N
0.753
ENSONIG00000019223
Oreochromis niloticus
ENSONIG00000019223
N
0.741
kdm5ba
Tetraodon nigroviridis
ENSTNIG00000007074
N
0.728
kdm5ba
Takifugu rubripes
ENSTRUG00000013308
N
0.728
kdm5bb
Oryzias latipes
ENSORLG00000014990
N
0.723
ENSGMOG00000019547
Gadus morhua
ENSGMOG00000019547
N
0.715
kdm5bb
Danio rerio
ENSDARG00000003098
N
0.698
ENSLOCG00000010123
Lepisosteus oculatus
ENSLOCG00000010123
N
0.698
ENSONIG00000016770
Oreochromis niloticus
ENSONIG00000016770
N
0.698
ENSPFOG00000006840
Poecilia formosa
ENSPFOG00000006840
N
0.698
ENSXMAG00000011463
Xiphophorus maculatus
ENSXMAG00000011463
N
0.698
ENSAMXG00000018648
Astyanax mexicanus
ENSAMXG00000018648
N
0.680
Kdm5d
Mus musculus
ENSMUSG00000056673
N
0.656
kdm5ba
Danio rerio
ENSDARG00000057093
N
0.652
kdm5bb
Gasterosteus aculeatus
ENSGACG00000011868
N
0.648
ENSPTRG00000021925
Pan troglodytes
ENSPTRG00000021925
N
0.648
Kdm5c
Rattus norvegicus
ENSRNOG00000057706
N
0.648
KDM5C
Sorex araneus
ENSSARG00000000542
N
0.648
ENSAMXG00000024732
Astyanax mexicanus
ENSAMXG00000024732
N
0.623
CapteG147496
Capitella teleta
CapteG147496
N
0.613
ENSLACG00000012136
Latimeria chalumnae
ENSLACG00000012136
N
0.612
KDM5B
Anolis carolinensis
ENSACAG00000005107
N
0.599
ENSAMEG00000012088
Ailuropoda melanoleuca
ENSAMEG00000012088
N
0.599
ENSAPLG00000007715
Anas platyrhynchos
ENSAPLG00000007715
N
0.599
KDM5B
Bos taurus
ENSBTAG00000006175
N
0.599
KDM5B
Canis familiaris
ENSCAFG00000010452
N
0.599
KDM5B
Choloepus hoffmanni
ENSCHOG00000012197
N
0.599
KDM5B
Callithrix jacchus
ENSCJAG00000006050
N
0.599
KDM5B
Cavia porcellus
ENSCPOG00000010644
N
0.599
ENSCSAG00000014155
Chlorocebus sabaeus
ENSCSAG00000014155
N
0.599
KDM5B
Dasypus novemcinctus
ENSDNOG00000003205
N
0.599
KDM5B
Equus caballus
ENSECAG00000014268
N
0.599
KDM5B
Echinops telfairi
ENSETEG00000018113
N
0.599
KDM5B
Felis catus
ENSFCAG00000013102
N
0.599
KDM5B
Homo sapiens
ENSG00000117139
N
0.599
ENSGALG00000000427
Gallus gallus
ENSGALG00000000427
N
0.599
KDM5B
Gorilla gorilla
ENSGGOG00000003073
N
0.599
KDM5B
Meleagris gallopavo
ENSMGAG00000001393
N
0.599
KDM5B
Microcebus murinus
ENSMICG00000006046
N
0.599
KDM5B
Macaca mulatta
ENSMMUG00000015233
N
0.599
KDM5B
Monodelphis domestica
ENSMODG00000000755
N
0.599
ENSMPUG00000011183
Mustela putorius furo
ENSMPUG00000011183
N
0.599
Kdm5b
Mus musculus
ENSMUSG00000042207
N
0.599
ENSNLEG00000018101
Nomascus leucogenys
ENSNLEG00000018101
N
0.599
KDM5B
Ornithorhynchus anatinus
ENSOANG00000002512
N
0.599
ENSOARG00000018421
Ovis aries
ENSOARG00000018421
N
0.599
KDM5B
Oryctolagus cuniculus
ENSOCUG00000008003
N
0.599
ENSPANG00000014633
Papio anubis
ENSPANG00000014633
N
0.599
ENSPPYG00000000346
Pongo abelii
ENSPPYG00000000346
N
0.599
KDM5B
Pan troglodytes
ENSPTRG00000001856
N
0.599
KDM5B
Pteropus vampyrus
ENSPVAG00000011030
N
0.599
Kdm5b
Rattus norvegicus
ENSRNOG00000060544
N
0.599
KDM5B
Sorex araneus
ENSSARG00000012265
N
0.599
ENSSHAG00000015215
Sarcophilus harrisii
ENSSHAG00000015215
N
0.599
KDM5B
Sus scrofa
ENSSSCG00000010928
N
0.599
ENSSTOG00000000372
Ictidomys tridecemlineatus
ENSSTOG00000000372
N
0.599
KDM5B
Tupaia belangeri
ENSTBEG00000006521
N
0.599
KDM5B
Tursiops truncatus
ENSTTRG00000001078
N
0.599
KDM5B
Vicugna pacos
ENSVPAG00000006056
N
0.599
Aan_R003738
Calypte anna
Aan_R003738
N
0.599
Afo_R005441
Aptenodytes forsteri
Afo_R005441
N
0.599
Brh_R004837
Buceros rhinoceros
Brh_R004837
N
0.599
Cmyd_10020716
Chelonia mydas
Cmyd_10020716
N
0.599
ENSP00000356233-D1
Bos grunniens
ENSP00000356233-D1
N
0.599
ENSP00000356233
Macaca fascicularis
ENSP00000356233
N
0.599
Myotis_brandtii_KDM5B_10008160
Myotis brandtii
Myotis_brandtii_KDM5B_10008160
N
0.599
Myotis_brandtii_KDM5B_10012819
Myotis brandtii
Myotis_brandtii_KDM5B_10012819
N
0.599
Ogr08783
Ophisaurus gracilis
Ogr08783
N
0.599
Tal_R003404
Tyto alba
Tal_R003404
N
0.599
ENSMLUG00000024285
Myotis lucifugus
ENSMLUG00000024285
N
0.596
ENSFALG00000002622
Ficedula albicollis
ENSFALG00000002622
N
0.585
KDM5B
Taeniopygia guttata
ENSTGUG00000001257
N
0.585
kdm5b
Xenopus tropicalis
XB-GENE-856240
N
0.585
KDM5B
Loxodonta africana
ENSLAFG00000005104
N
0.584
ENSPMAG00000003030
Petromyzon marinus
ENSPMAG00000003030
N
0.580
ENSMEUG00000014994
Macropus eugenii
ENSMEUG00000014994
N
0.562
ENSGMOG00000019538
Gadus morhua
ENSGMOG00000019538
N
0.544
ACEP21606
Atta cephalotes
ACEP21606
N
0.522
GB52426
Apis mellifera
GB52426
N
0.522
LotgiG205701
Lottia gigantea
LotgiG205701
N
0.522
Cflo_12071--XP_001122635.1_APIME
Camponotus floridanus
Cflo_12071--XP_001122635.1_APIME
N
0.522
ENSMLUG00000015035
Myotis lucifugus
ENSMLUG00000015035
N
0.509
ADIR009258
Anopheles dirus
ADIR009258
N
0.507
AFAF009884
Anopheles farauti
AFAF009884
N
0.507
Sakowv30029063m.g
Saccoglossus kowalevskii
Sakowv30029063m.g
N
0.502
CLEC007177
Cimex lectularius
CLEC007177
N
0.499
NV16665
Nasonia vitripennis
NV16665
N
0.498
SMAR004279
Strigamia maritima
SMAR004279
N
0.485
ADAC004659
Anopheles darlingi
ADAC004659
N
0.482
AGAP004854
Anopheles gambiae
AGAP004854
N
0.482
AALB003225
Anopheles albimanus
AALB003225
N
0.482
AARA006109
Anopheles arabiensis
AARA006109
N
0.482
AATE009040
Anopheles atroparvus
AATE009040
N
0.482
ACHR007377
Anopheles christyi
ACHR007377
N
0.482
ACOM038290
Anopheles coluzzii
ACOM038290
N
0.482
ACUA025224
Anopheles culicifacies
ACUA025224
N
0.482
AEPI000432
Anopheles epiroticus
AEPI000432
N
0.482
AFUN008496
Anopheles funestus
AFUN008496
N
0.482
AMAM014474
Anopheles maculatus
AMAM014474
N
0.482
AMEC004492
Anopheles melas
AMEC004492
N
0.482
AMEM014063
Anopheles merus
AMEM014063
N
0.482
AMIN011637
Anopheles minimus
AMIN011637
N
0.482
AQUA000338
Anopheles quadriannulatus
AQUA000338
N
0.482
ASTEI05939
Anopheles stephensi
ASTEI05939
N
0.482
HMEL015554
Heliconius melpomene
HMEL015554
N
0.474
KGM_20601
Danaus plexippus
KGM_20601
N
0.474
MCINX012993
Melitaea cinxia
MCINX012993
N
0.474
LDEC003750
Leptinotarsa decemlineata
LDEC003750
N
0.469
CGI_10007771
Crassostrea gigas
CGI_10007771
N
0.457
ENSSHAG00000000588
Sarcophilus harrisii
ENSSHAG00000000588
N
0.450
tetur02g05990
Tetranychus urticae
tetur02g05990
N
0.449
RPRC012847
Rhodnius prolixus
RPRC012847
N
0.444
BGIBMGA004558
Bombyx mori
BGIBMGA004558
N
0.438
LLOJ009523
Lutzomyia longipalpis
LLOJ009523
N
0.437
CLEC002198
Cimex lectularius
CLEC002198
N
0.427