CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA11G02580
(
Glycine max
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
GLYMA11G02580
T015001_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA11G02580.4
ARID/BRIGHT
97
185
DSKTFDLDYSRFLRDHSGKKSRKRVVFEGEELDLCMLFNAVKRFGGYDKVVDGKKWGDVARFVRSSGKISDCAKHVLCQLYREHLCDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Glycine max
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G42890
Glycine max
GLYMA01G42890
N
0.763
chr2.CM0304.950.nc
Lotus japonicus
chr2.CM0304.950.nc
N
0.719
MDP0000287313
Malus domestica
MDP0000287313
N
0.706
orange1.1g000212m.g
Citrus sinensis
orange1.1g000212m.g
N
0.687
TCM_016246
Theobroma cacao
TCM_016246
N
0.682
30190.m011218
Ricinus communis
30190.m011218
N
0.674
cassava14944.m1
Manihot esculenta
cassava14944.m1
N
0.666
Pm023825
Prunus mume
Pm023825
N
0.663
AT1G63490
Arabidopsis thaliana
AT1G63490
N
0.660
scaffold_200168.1
Arabidopsis lyrata
scaffold_200168.1
N
0.660
Gorai.004G211700
Gossypium raimondii
Gorai.004G211700
N
0.660
Bo9g029100
Brassica oleracea
Bo9g029100
N
0.655
Cagra.2104s0024
Capsella grandiflora
Cagra.2104s0024
N
0.655
PK05702.1
Cannabis sativa
PK05702.1
N
0.647
MTR_5g010300
Medicago truncatula
MTR_5g010300
N
0.646
MDP0000158904
Malus domestica
MDP0000158904
N
0.639
MDP0000162827
Malus domestica
MDP0000162827
N
0.639
MDP0000286412
Malus domestica
MDP0000286412
N
0.639
Eucgr.D01851
Eucalyptus grandis
Eucgr.D01851
N
0.616
Cla011637
Citrullus lanatus
Cla011637
N
0.613
Bostr.9600s0015
Boechera stricta
Bostr.9600s0015
N
0.612
Solyc08g081000.2
Solanum lycopersicum
Solyc08g081000.2
N
0.609
gene32474-v1.0-hybrid
Fragaria vesca
gene32474-v1.0-hybrid
N
0.587
PDK_20s1401711g002
Phoenix dactylifera
PDK_20s1401711g002
N
0.535
Thhalv10023217m.g
Eutrema salsugineum
Thhalv10023217m.g
N
0.534
AMTR_s00009p00253500
Amborella trichopoda
AMTR_s00009p00253500
N
0.525
Aquca_038_00045
Aquilegia coerulea
Aquca_038_00045
N
0.523
Lus10008495.g
Linum usitatissimum
Lus10008495.g
N
0.522
mgf018831m
Mimulus guttatus
mgf018831m
N
0.516
GRMZM2G466292
Zea mays
GRMZM2G466292
N
0.455
Sb10g031260
Sorghum bicolor
Sb10g031260
N
0.455
BRADI1G29247
Brachypodium distachyon
BRADI1G29247
N
0.447
Cla007529
Citrullus lanatus
Cla007529
I
0.438
orange1.1g020305m.g
Citrus sinensis
orange1.1g020305m.g
I
0.427