scaffold_200168.1 (Arabidopsis lyrata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 scaffold_200168.1 T015567_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_200168.1 ARID/BRIGHT 96 184

Links

Other ARID/BRIGHT family TFs
Other Arabidopsis lyrata TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.785
Bo9g029100 Brassica oleracea Bo9g029100 N 0.704
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.704
TCM_016246 Theobroma cacao TCM_016246 N 0.684
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.662
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.661
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.660
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.660
Thhalv10023217m.g Eutrema salsugineum Thhalv10023217m.g N 0.659
Pm023825 Prunus mume Pm023825 N 0.657
PK05702.1 Cannabis sativa PK05702.1 N 0.649
30190.m011218 Ricinus communis 30190.m011218 N 0.639
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.639
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.630
Cla011637 Citrullus lanatus Cla011637 N 0.615
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.614
MDP0000158904 Malus domestica MDP0000158904 N 0.612
MDP0000162827 Malus domestica MDP0000162827 N 0.612
MDP0000286412 Malus domestica MDP0000286412 N 0.612
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.611
MDP0000287313 Malus domestica MDP0000287313 N 0.603
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.590
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.581
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.580
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.526
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.522
mgf018831m Mimulus guttatus mgf018831m N 0.516
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.497
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.470
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.455
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.455
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.447
Cla007529 Citrullus lanatus Cla007529 I 0.438
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.427