CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IGS.gm_25_00027
(
Chlorella NC64A
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
IGS.gm_25_00027
T016028_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
IGS.gm_25_00027
ARID/BRIGHT
279
366
ESAAFMAQLTSFFQSRSRTMPAPRFMHRELDVAKLWRLVDGHGGYDEVVCHSKLWAQVGRHFDPPKSMTNLSYNMKRMYTRSGLLAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Chlorella NC64A
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.7128s0681
Boechera stricta
Bostr.7128s0681
I
0.448
Cagra.6160s0006
Capsella grandiflora
Cagra.6160s0006
I
0.425
Carubv10009301m.g
Capsella rubella
Carubv10009301m.g
I
0.425