CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.9600s0015
(
Boechera stricta
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Bostr.9600s0015
T016062_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.9600s0015.1.p
ARID/BRIGHT
100
188
NSKTFQLEYSRFLEEHLGKKLKKKVVFEGEELDLCKAFNAVKRFGGYEKVIKGKKWGEVYQFMSSGEKISKCAKHVLCQLYKEHLHDFE
Links
Other
ARID/BRIGHT
family TFs
Other
Boechera stricta
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G63490
Arabidopsis thaliana
AT1G63490
N
0.661
scaffold_200168.1
Arabidopsis lyrata
scaffold_200168.1
N
0.661
Bo9g029100
Brassica oleracea
Bo9g029100
N
0.655
Cagra.2104s0024
Capsella grandiflora
Cagra.2104s0024
N
0.655
Thhalv10023217m.g
Eutrema salsugineum
Thhalv10023217m.g
N
0.635
GLYMA01G42890
Glycine max
GLYMA01G42890
N
0.612
GLYMA11G02580
Glycine max
GLYMA11G02580
N
0.612
orange1.1g000212m.g
Citrus sinensis
orange1.1g000212m.g
N
0.592
chr2.CM0304.950.nc
Lotus japonicus
chr2.CM0304.950.nc
N
0.590
TCM_016246
Theobroma cacao
TCM_016246
N
0.560
Pm023825
Prunus mume
Pm023825
N
0.560
MDP0000287313
Malus domestica
MDP0000287313
N
0.555
30190.m011218
Ricinus communis
30190.m011218
N
0.552
cassava14944.m1
Manihot esculenta
cassava14944.m1
N
0.544
Gorai.004G211700
Gossypium raimondii
Gorai.004G211700
N
0.538
MTR_5g010300
Medicago truncatula
MTR_5g010300
N
0.531
PK05702.1
Cannabis sativa
PK05702.1
N
0.526
MDP0000158904
Malus domestica
MDP0000158904
N
0.525
MDP0000162827
Malus domestica
MDP0000162827
N
0.525
MDP0000286412
Malus domestica
MDP0000286412
N
0.525
Eucgr.D01851
Eucalyptus grandis
Eucgr.D01851
N
0.521
Cla011637
Citrullus lanatus
Cla011637
N
0.518
gene32474-v1.0-hybrid
Fragaria vesca
gene32474-v1.0-hybrid
N
0.493
Solyc08g081000.2
Solanum lycopersicum
Solyc08g081000.2
N
0.488
Lus10008495.g
Linum usitatissimum
Lus10008495.g
N
0.472
PDK_20s1401711g002
Phoenix dactylifera
PDK_20s1401711g002
N
0.470
mgf018831m
Mimulus guttatus
mgf018831m
N
0.430