Thhalv10023217m.g (Eutrema salsugineum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Thhalv10023217m.g T016191_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10023217m ARID/BRIGHT 96 184

Links

Other ARID/BRIGHT family TFs
Other Eutrema salsugineum TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g029100 Brassica oleracea Bo9g029100 N 0.665
Cagra.2104s0024 Capsella grandiflora Cagra.2104s0024 N 0.665
AT1G63490 Arabidopsis thaliana AT1G63490 N 0.659
scaffold_200168.1 Arabidopsis lyrata scaffold_200168.1 N 0.659
Bostr.9600s0015 Boechera stricta Bostr.9600s0015 N 0.635
chr2.CM0304.950.nc Lotus japonicus chr2.CM0304.950.nc N 0.600
Cla011637 Citrullus lanatus Cla011637 N 0.581
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.572
Eucgr.D01851 Eucalyptus grandis Eucgr.D01851 N 0.568
TCM_016246 Theobroma cacao TCM_016246 N 0.558
Pm023825 Prunus mume Pm023825 N 0.558
MTR_5g010300 Medicago truncatula MTR_5g010300 N 0.542
Gorai.004G211700 Gossypium raimondii Gorai.004G211700 N 0.536
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.534
GLYMA11G02580 Glycine max GLYMA11G02580 N 0.534
MDP0000158904 Malus domestica MDP0000158904 N 0.523
MDP0000162827 Malus domestica MDP0000162827 N 0.523
MDP0000286412 Malus domestica MDP0000286412 N 0.523
PK05702.1 Cannabis sativa PK05702.1 N 0.523
Lus10008495.g Linum usitatissimum Lus10008495.g N 0.520
orange1.1g000212m.g Citrus sinensis orange1.1g000212m.g N 0.515
30190.m011218 Ricinus communis 30190.m011218 N 0.512
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.504
gene32474-v1.0-hybrid Fragaria vesca gene32474-v1.0-hybrid N 0.490
GRMZM2G466292 Zea mays GRMZM2G466292 N 0.487
Sb10g031260 Sorghum bicolor Sb10g031260 N 0.487
Aquca_038_00045 Aquilegia coerulea Aquca_038_00045 N 0.487
BRADI1G29247 Brachypodium distachyon BRADI1G29247 N 0.479
mgf018831m Mimulus guttatus mgf018831m N 0.477
MDP0000287313 Malus domestica MDP0000287313 N 0.477
PDK_20s1401711g002 Phoenix dactylifera PDK_20s1401711g002 N 0.459
LPERR06G23820 Leersia perrieri LPERR06G23820 N 0.434
AMTR_s00009p00253500 Amborella trichopoda AMTR_s00009p00253500 N 0.431