CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNAPOd2T00026226001
(
Oikopleura dioica
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
SNAPOd2T00026226001
T016253_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00026226001
ARID/BRIGHT
80
164
VRQNFLDKVSRFWEFQGIALKIPRVENELLCLFTFHDKVQKLGGFVKCSEDRKWGELALSLGFASKSGSASALRGHYERILYPFD
Links
Other
ARID/BRIGHT
family TFs
Other
Oikopleura dioica
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIBMGA004558
Bombyx mori
BGIBMGA004558
N
0.472
HMEL015554
Heliconius melpomene
HMEL015554
N
0.472
KGM_20601
Danaus plexippus
KGM_20601
N
0.472
MCINX012993
Melitaea cinxia
MCINX012993
N
0.472
ENSPMAG00000003030
Petromyzon marinus
ENSPMAG00000003030
N
0.462
Sakowv30029063m.g
Saccoglossus kowalevskii
Sakowv30029063m.g
N
0.462
CapteG147496
Capitella teleta
CapteG147496
N
0.454
ADAC004659
Anopheles darlingi
ADAC004659
N
0.452
AGAP004854
Anopheles gambiae
AGAP004854
N
0.452
AALB003225
Anopheles albimanus
AALB003225
N
0.452
AARA006109
Anopheles arabiensis
AARA006109
N
0.452
AATE009040
Anopheles atroparvus
AATE009040
N
0.452
ACHR007377
Anopheles christyi
ACHR007377
N
0.452
ACOM038290
Anopheles coluzzii
ACOM038290
N
0.452
ACUA025224
Anopheles culicifacies
ACUA025224
N
0.452
ADIR009258
Anopheles dirus
ADIR009258
N
0.452
AEPI000432
Anopheles epiroticus
AEPI000432
N
0.452
AFAF009884
Anopheles farauti
AFAF009884
N
0.452
AFUN008496
Anopheles funestus
AFUN008496
N
0.452
AMAM014474
Anopheles maculatus
AMAM014474
N
0.452
AMEC004492
Anopheles melas
AMEC004492
N
0.452
AMEM014063
Anopheles merus
AMEM014063
N
0.452
AMIN011637
Anopheles minimus
AMIN011637
N
0.452
AQUA000338
Anopheles quadriannulatus
AQUA000338
N
0.452
ASTEI05939
Anopheles stephensi
ASTEI05939
N
0.452
CGI_10007771
Crassostrea gigas
CGI_10007771
N
0.451
SMAR004279
Strigamia maritima
SMAR004279
N
0.447
kdm5ba
Danio rerio
ENSDARG00000057093
N
0.441
kdm5bb
Danio rerio
ENSDARG00000003098
N
0.427
ENSLOCG00000010123
Lepisosteus oculatus
ENSLOCG00000010123
N
0.427
Kdm5d
Mus musculus
ENSMUSG00000056673
N
0.427
ENSONIG00000016770
Oreochromis niloticus
ENSONIG00000016770
N
0.427
kdm5bb
Oryzias latipes
ENSORLG00000014990
N
0.427
ENSPFOG00000006840
Poecilia formosa
ENSPFOG00000006840
N
0.427
ENSPTRG00000021925
Pan troglodytes
ENSPTRG00000021925
N
0.427
Kdm5c
Rattus norvegicus
ENSRNOG00000057706
N
0.427
KDM5C
Sorex araneus
ENSSARG00000000542
N
0.427
ENSXMAG00000011463
Xiphophorus maculatus
ENSXMAG00000011463
N
0.427