chr1.CM0121.260.nc (Lotus japonicus)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 chr1.CM0121.260.nc T016271_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0121.260.nc ARID/BRIGHT 31 116

Links

Other ARID/BRIGHT family TFs
Other Lotus japonicus TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr1.CM0121.100.nd Lotus japonicus chr1.CM0121.100.nd N 0.785
LjSGA_042579.1 Lotus japonicus LjSGA_042579.1 N 0.644
LjSGA_086105.1 Lotus japonicus LjSGA_086105.1 N 0.629
Cla007529 Citrullus lanatus Cla007529 I 0.594
orange1.1g020305m.g Citrus sinensis orange1.1g020305m.g I 0.583
Cla016376 Citrullus lanatus Cla016376 I 0.555
PDK_20s1654351g001 Phoenix dactylifera PDK_20s1654351g001 N 0.535
fgeneshHS_pg.scaffold_74000026 Naegleria gruberi fgeneshHS_pg.scaffold_74000026 N 0.478
30190.m011218 Ricinus communis 30190.m011218 N 0.455
estExt_fgenesh1_pg.C_130231 Bigelowiella natans estExt_fgenesh1_pg.C_130231 N 0.454
LjSGA_065856.1.1 Lotus japonicus LjSGA_065856.1.1 N 0.451
Solyc08g081000.2 Solanum lycopersicum Solyc08g081000.2 N 0.448
fgenesh1_pg.45__161 Bigelowiella natans fgenesh1_pg.45__161 N 0.440
GLYMA01G42890 Glycine max GLYMA01G42890 N 0.440
TCM_016246 Theobroma cacao TCM_016246 N 0.440
PK05702.1 Cannabis sativa PK05702.1 N 0.440
EuGene.0000090416 Micromonas pusilla EuGene.0000090416 N 0.434
estExt_fgeneshPB_pg.C_60357 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_60357 N 0.430
cassava14944.m1 Manihot esculenta cassava14944.m1 N 0.426