CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000451100
(
Hymenolepis microstoma
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
HmN_000451100
T016565_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.467
0.424
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.444
0.424
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.444
0.424
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.444
0.424
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.444
0.424
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000451100
ARID/BRIGHT
576
661
ERRQWLEHYFFFMESIEKPLTGLPQVVKQPLDLYRFYQAVRERGGVLEVIKTKRWKEISQLFNINASASAAYTLRKNYCKYLLDYE
Links
Other
ARID/BRIGHT
family TFs
Other
Hymenolepis microstoma
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_06547
Echinococcus canadensis
ECANG7_06547
I
0.785
EmuJ_001157200
Echinococcus multilocularis
EmuJ_001157200
I
0.785
HDID_0000342501
Hymenolepis diminuta
HDID_0000342501
I
0.785
HNAJ_0000082601
Hymenolepis nana
HNAJ_0000082601
I
0.785
MCOS_0000539101
Mesocestoides corti
MCOS_0000539101
I
0.785
TsM_000529300
Taenia solium
TsM_000529300
I
0.785
TTAC_0000915101
Hydatigera taeniaeformis
TTAC_0000915101
I
0.785
SSLN_0000405401
Schistocephalus solidus
SSLN_0000405401
I
0.747
csin104729
Clonorchis sinensis
csin104729
N
0.684
D915_06741
Fasciola hepatica
D915_06741
N
0.684
T265_07301
Opisthorchis viverrini
T265_07301
N
0.684
Sjc_0060650
Schistosoma japonicum
Sjc_0060650
N
0.664
PXEA_0000852601
Protopolystoma xenopodis
PXEA_0000852601
N
0.649
Smp_156170
Schistosoma mansoni
Smp_156170
N
0.628
A_08377
Schistosoma haematobium
A_08377
N
0.628
SCUD_0001703701
Schistosoma curassoni
SCUD_0001703701
N
0.628
SMTD_0000055001
Schistosoma mattheei
SMTD_0000055001
N
0.628
CpipJ_CPIJ010152
Culex pipiens
CpipJ_CPIJ010152
N
0.559
ADAC008556
Anopheles darlingi
ADAC008556
N
0.559
AGAP001786
Anopheles gambiae
AGAP001786
N
0.559
BGIBMGA010273
Bombyx mori
BGIBMGA010273
N
0.559
CPIJ010152
Culex quinquefasciatus
CPIJ010152
N
0.559
osa
Drosophila yakuba
FBgn0041640
N
0.559
GF23141
Drosophila ananassae
FBgn0100135
N
0.559
GG16758
Drosophila erecta
FBgn0108988
N
0.559
GH15872
Drosophila grimshawi
FBgn0123343
N
0.559
GI23637
Drosophila mojavensis
FBgn0146363
N
0.559
GM15347
Drosophila sechellia
FBgn0170267
N
0.559
GJ24712
Drosophila virilis
FBgn0211788
N
0.559
GK22507
Drosophila willistoni
FBgn0224484
N
0.559
GA26236
Drosophila pseudoobscura
FBgn0247610
N
0.559
osa
Drosophila melanogaster
FBgn0261885
N
0.559
KGM_12579
Danaus plexippus
KGM_12579
N
0.559
LCUP015823
Lucilia cuprina
LCUP015823
N
0.559
AALB003072
Anopheles albimanus
AALB003072
N
0.559
AARA000452
Anopheles arabiensis
AARA000452
N
0.559
AATE006796
Anopheles atroparvus
AATE006796
N
0.559
ACHR005336
Anopheles christyi
ACHR005336
N
0.559
ACUA025715
Anopheles culicifacies
ACUA025715
N
0.559
ADIR002498
Anopheles dirus
ADIR002498
N
0.559
AEPI003661
Anopheles epiroticus
AEPI003661
N
0.559
AFAF010393
Anopheles farauti
AFAF010393
N
0.559
AFUN009891
Anopheles funestus
AFUN009891
N
0.559
AMAM004700
Anopheles maculatus
AMAM004700
N
0.559
AMEC021754
Anopheles melas
AMEC021754
N
0.559
AMEM013442
Anopheles merus
AMEM013442
N
0.559
AMIN000696
Anopheles minimus
AMIN000696
N
0.559
AQUA004105
Anopheles quadriannulatus
AQUA004105
N
0.559
ASTEI11512
Anopheles stephensi
ASTEI11512
N
0.559
LLOJ000864
Lutzomyia longipalpis
LLOJ000864
N
0.559
MDOA004559
Musca domestica
MDOA004559
N
0.559
PPAI002183
Phlebotomus papatasi
PPAI002183
N
0.559
AAEL017280
Aedes aegypti
AAEL017280
N
0.548
ACEP26642
Atta cephalotes
ACEP26642
N
0.546
GB44899
Apis mellifera
GB44899
N
0.546
PHUM080380
Pediculus humanus
PHUM080380
N
0.546
RPRC005301
Rhodnius prolixus
RPRC005301
N
0.546
SINV22763
Solenopsis invicta
SINV22763
N
0.546
TC013586
Tribolium castaneum
TC013586
N
0.546
YQE_09239
Dendroctonus ponderosae
YQE_09239
N
0.546
Cflo_01219--XP_395512.3_APIME
Camponotus floridanus
Cflo_01219--XP_395512.3_APIME
N
0.546
Hsal_01939--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01939--XP_395512.3_APIME
N
0.546
CLEC012210
Cimex lectularius
CLEC012210
N
0.546
HHAL005964-PA
Halyomorpha halys
HHAL005964-PA
N
0.546
DAPPUDRAFT_327651
Daphnia pulex
DAPPUDRAFT_327651
N
0.524
LDEC011073
Leptinotarsa decemlineata
LDEC011073
I
0.523
ACYPI006497
Acyrthosiphon pisum
ACYPI006497
N
0.521
ISCW014189
Ixodes scapularis
ISCW014189
I
0.521
SMAR006121
Strigamia maritima
SMAR006121
I
0.521
SMU15017366
Schmidtea mediterranea
SMU15017366
N
0.520
SMU15033702
Schmidtea mediterranea
SMU15033702
N
0.520
SMAR003184
Strigamia maritima
SMAR003184
I
0.510
ACYPI009013
Acyrthosiphon pisum
ACYPI009013
D
0.467
ACYPI34394
Acyrthosiphon pisum
ACYPI34394
I
0.467
DME_0001005001
Dracunculus medinensis
DME_0001005001
N
0.457
EVEC_0000024601
Enterobius vermicularis
EVEC_0000024601
N
0.452
tetur02g14160
Tetranychus urticae
tetur02g14160
N
0.448
NV21537
Nasonia vitripennis
NV21537
N
0.446
AGAP005156
Anopheles gambiae
AGAP005156
I
0.444
DAPPUDRAFT_3993
Daphnia pulex
DAPPUDRAFT_3993
I
0.444
retn
Drosophila melanogaster
FBgn0004795
D
0.444
GA18855
Drosophila pseudoobscura
FBgn0078855
I
0.444
GF13069
Drosophila ananassae
FBgn0090102
I
0.444
GG22872
Drosophila erecta
FBgn0115029
I
0.444
GH20664
Drosophila grimshawi
FBgn0128127
I
0.444
GI19027
Drosophila mojavensis
FBgn0141766
I
0.444
GL16874
Drosophila persimilis
FBgn0154478
I
0.444
GM16032
Drosophila sechellia
FBgn0170948
I
0.444
GD11780
Drosophila simulans
FBgn0183519
I
0.444
GJ19993
Drosophila virilis
FBgn0207134
I
0.444
GK23065
Drosophila willistoni
FBgn0225027
I
0.444
GE14310
Drosophila yakuba
FBgn0231925
I
0.444
GB55596
Apis mellifera
GB55596
I
0.444
KGM_11440
Danaus plexippus
KGM_11440
I
0.444
NV17632
Nasonia vitripennis
NV17632
I
0.444
TC008720
Tribolium castaneum
TC008720
I
0.444
MDOA006752
Musca domestica
MDOA006752
I
0.444
ARID3B
Oryctolagus cuniculus
ENSOCUG00000025077
I
0.439
ARID3B
Ochotona princeps
ENSOPRG00000002281
I
0.439
SPU_023530
Strongylocentrotus purpuratus
SPU_023530
I
0.437
CapteG64285
Capitella teleta
CapteG64285
I
0.431
CGI_10006980
Crassostrea gigas
CGI_10006980
I
0.431
LotgiG93934
Lottia gigantea
LotgiG93934
I
0.431
Ocbimv22032810m.g
Octopus bimaculoides
Ocbimv22032810m.g
I
0.430
SMU15014499
Schmidtea mediterranea
SMU15014499
I
0.430
ECANG7_05318
Echinococcus canadensis
ECANG7_05318
I
0.430
EmuJ_000964700
Echinococcus multilocularis
EmuJ_000964700
I
0.430
HmN_000157800
Hymenolepis microstoma
HmN_000157800
I
0.430
TsM_000440000
Taenia solium
TsM_000440000
I
0.430
SBAD_0000668001
Soboliphyme baturini
SBAD_0000668001
N
0.427
BGLB000541
Biomphalaria glabrata
BGLB000541
I
0.422