CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0001659601
(
Protopolystoma xenopodis
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
PXEA_0001659601
T016666_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0001659601-mRNA-1
ARID/BRIGHT
80
174
RSDFITSLVSFWQVKVSSYMNIHQFQDVKLHMPHIKGRPLDIFLLWNIVKGNGGYANVCGKKMWCSICSELCLDPSPSTASALSSKYRSILLPFE
Links
Other
ARID/BRIGHT
family TFs
Other
Protopolystoma xenopodis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HmN_000441300
Hymenolepis microstoma
HmN_000441300
N
0.489
SMTD_0000266501
Schistosoma mattheei
SMTD_0000266501
N
0.460
ENSSSCG00000028486
Sus scrofa
ENSSSCG00000028486
N
0.445
Smp_156290
Schistosoma mansoni
Smp_156290
N
0.437
SROB_0002139201
Schistosoma rodhaini
SROB_0002139201
N
0.437
TRE_0001129601
Trichobilharzia regenti
TRE_0001129601
N
0.437
HDID_0000434601
Hymenolepis diminuta
HDID_0000434601
N
0.431
HNAJ_0000973401
Hymenolepis nana
HNAJ_0000973401
N
0.429
SPER_0002792401
Spirometra erinaceieuropaei
SPER_0002792401
N
0.429
ENSONIG00000008068
Oreochromis niloticus
ENSONIG00000008068
N
0.427
ENSGMOG00000019538
Gadus morhua
ENSGMOG00000019538
N
0.425
Sjc_0011400
Schistosoma japonicum
Sjc_0011400
N
0.423
A_00348
Schistosoma haematobium
A_00348
N
0.423
SCUD_0000559501
Schistosoma curassoni
SCUD_0000559501
N
0.423