CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARF13
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Al_scaffold_0001_3500
T018319_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Al_scaffold_0001_3500
B3
126
228
FSKILTSSDANTHGGLSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLFATTKRLIVGDAFVFLRGENGELGVGIRRAR
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA03G41920
Glycine max
GLYMA03G41920
I
0.724
MTR_4g021580
Medicago truncatula
MTR_4g021580
I
0.724
ARF13
Arabidopsis thaliana
AT1G34170
N
0.714
GLYMA01G25270
Glycine max
GLYMA01G25270
I
0.714
TCM_005126
Theobroma cacao
TCM_005126
I
0.714
Ca_21948
Cicer arietinum
Ca_21948
I
0.714
Cucsa.078800
Cucumis sativus
Cucsa.078800
I
0.714
Thhalv10029161m.g
Eutrema salsugineum
Thhalv10029161m.g
I
0.714
Thhalv10029379m.g
Eutrema salsugineum
Thhalv10029379m.g
I
0.714
GLYMA03G17450
Glycine max
GLYMA03G17450
I
0.704
POPTR_0001s10900
Populus trichocarpa
POPTR_0001s10900
I
0.704
PRUPE_ppa002230mg
Prunus persica
PRUPE_ppa002230mg
I
0.704
TCM_016500
Theobroma cacao
TCM_016500
I
0.704
VIT_15s0046g00290
Vitis vinifera
VIT_15s0046g00290
I
0.704
Pm018352
Prunus mume
Pm018352
I
0.704
30068.m002516
Ricinus communis
30068.m002516
I
0.704
Cucsa.114840
Cucumis sativus
Cucsa.114840
I
0.704
Ciclev10019131m.g
Citrus clementina
Ciclev10019131m.g
I
0.704
evm.TU.supercontig_96.40
Carica papaya
evm.TU.supercontig_96.40
I
0.704
Gorai.001G153900
Gossypium raimondii
Gorai.001G153900
I
0.704
Gorai.008G126200
Gossypium raimondii
Gorai.008G126200
I
0.704
MDP0000194603
Malus domestica
MDP0000194603
I
0.704
orange1.1g005491m.g
Citrus sinensis
orange1.1g005491m.g
I
0.704
SapurV1A.0035s0230
Salix purpurea
SapurV1A.0035s0230
I
0.704
PK07332.1
Cannabis sativa
PK07332.1
I
0.704
LjSGA_059323.1
Lotus japonicus
LjSGA_059323.1
I
0.704