CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g083590
(
Brassica oleracea
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bo4g083590
T018651_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g083590.1
B3
128
229
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVATDLHNNERHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRQNEELRVGVRRHM
Bo4g083590.1
B3
593
636
KLEEMFDIKGELIESTKKWQVVYTDDEDDMMMVGDDPWNEFCGM
Links
Other
B3
family TFs
Other
Brassica oleracea
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0996s0001
Capsella grandiflora
Cagra.0996s0001
N
0.938
Carubv10022415m.g
Capsella rubella
Carubv10022415m.g
N
0.938
Bo1g090350
Brassica oleracea
Bo1g090350
N
0.908
Bra035427
Brassica rapa
Bra035427
N
0.908
ARF1
Arabidopsis lyrata
fgenesh2_kg.2__468__AT1G59750.1
N
0.899
GLYMA12G28550
Glycine max
GLYMA12G28550
N
0.899
Thhalv10023326m.g
Eutrema salsugineum
Thhalv10023326m.g
N
0.894
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.891
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
0.881
Bostr.10040s0256
Boechera stricta
Bostr.10040s0256
N
0.870
Ciclev10000491m.g
Citrus clementina
Ciclev10000491m.g
N
0.870
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.862
TCM_027113
Theobroma cacao
TCM_027113
I
0.858
ARF1
Arabidopsis thaliana
AT1G59750
N
0.855
Cla001927
Citrullus lanatus
Cla001927
N
0.853
Cucsa.183410
Cucumis sativus
Cucsa.183410
N
0.853
29609.m000587
Ricinus communis
29609.m000587
N
0.849
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.838
cassava11453.m1
Manihot esculenta
cassava11453.m1
N
0.830
cassava11454.m1
Manihot esculenta
cassava11454.m1
N
0.830
cassava11455.m1
Manihot esculenta
cassava11455.m1
N
0.830
cassava11456.m1
Manihot esculenta
cassava11456.m1
N
0.830
cassava7098.valid.m1
Manihot esculenta
cassava7098.valid.m1
N
0.830
cassava7099.valid.m1
Manihot esculenta
cassava7099.valid.m1
N
0.830
mgf006427m
Mimulus guttatus
mgf006427m
N
0.824
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.823
GLYMA07G40270
Glycine max
GLYMA07G40270
N
0.816
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.815
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.814
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.808
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.807
Gorai.011G091100
Gossypium raimondii
Gorai.011G091100
N
0.787
OGLUM02G20880
Oryza glumaepatula
OGLUM02G20880
N
0.770
OBART02G20600
Oryza barthii
OBART02G20600
N
0.765
OLONG_012362
Oryza longistaminata
OLONG_012362
N
0.765
OMERI02G20310
Oryza meridionalis
OMERI02G20310
N
0.765
ONIVA02G22590
Oryza nivara
ONIVA02G22590
N
0.765
ORUFI02G21640
Oryza rufipogon
ORUFI02G21640
N
0.765
ARF7
Oryza sativa
OS02G0557200
N
0.765
BGIOSGA008429
Oryza indica
BGIOSGA008429
N
0.759
OPUNC02G18520
Oryza punctata
OPUNC02G18520
N
0.759
ORGLA02G0176700
Oryza glaberrima
ORGLA02G0176700
N
0.759
Sb04g022830
Sorghum bicolor
Sb04g022830
N
0.759
Traes_2DL_A86E54838
Triticum aestivum
Traes_2DL_A86E54838
N
0.754
Traes_2AL_89543BA1A
Triticum aestivum
Traes_2AL_89543BA1A
N
0.743
TRIUR3_33501
Triticum urartu
TRIUR3_33501
N
0.743
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.733
BRADI4G17410
Brachypodium distachyon
BRADI4G17410
I
0.724
Cla015243
Citrullus lanatus
Cla015243
N
0.721
AMTR_s00021p00221770
Amborella trichopoda
AMTR_s00021p00221770
N
0.712
VIT_18s0089g00910
Vitis vinifera
VIT_18s0089g00910
N
0.709
Ca_17636
Cicer arietinum
Ca_17636
N
0.709
29742.m001397
Ricinus communis
29742.m001397
N
0.709
GSMUA_Achr6G16450_001
Musa acuminata
GSMUA_Achr6G16450_001
N
0.704
BGIOSGA036199
Oryza indica
BGIOSGA036199
N
0.702
OBART12G11990
Oryza barthii
OBART12G11990
N
0.702
OGLUM12G13560
Oryza glumaepatula
OGLUM12G13560
N
0.702
OLONG_019549
Oryza longistaminata
OLONG_019549
N
0.702
OMERI12G08550
Oryza meridionalis
OMERI12G08550
N
0.702
ONIVA12G12070
Oryza nivara
ONIVA12G12070
N
0.702
OPUNC12G10620
Oryza punctata
OPUNC12G10620
N
0.702
ORGLA12G0109100
Oryza glaberrima
ORGLA12G0109100
N
0.702
ORUFI12G13110
Oryza rufipogon
ORUFI12G13110
N
0.702
ARF24
Oryza sativa
OS12G0479400
N
0.702