CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.3__2702__AT3G24850.1
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
fgenesh2_kg.3__2702__AT3G24850.1
T019210_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.3__2702__AT3G24850.1
B3
143
258
FEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRIIDKDINNDKKIGVGAILVDQRSEKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKDGDNISLWSFRCCGILCF
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0003_2791
Arabidopsis lyrata
Al_scaffold_0003_2791
N
0.979
Bostr.19424s0112
Boechera stricta
Bostr.19424s0112
N
0.957
scaffold_303024.1
Arabidopsis lyrata
scaffold_303024.1
N
0.936
AT5G24050
Arabidopsis thaliana
AT5G24050
N
0.926
Cagra.0139s0005
Capsella grandiflora
Cagra.0139s0005
N
0.917
Carubv10016313m.g
Capsella rubella
Carubv10016313m.g
N
0.865
Thhalv10029136m.g
Eutrema salsugineum
Thhalv10029136m.g
N
0.724
Bostr.25219s0370
Boechera stricta
Bostr.25219s0370
N
0.706