CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr1G08230_001
(
Musa acuminata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
GSMUA_Achr1G08230_001
T019466_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF8
M01697_2.00
Arabidopsis thaliana
NHTGTCGGN
NCCGACADN
PBM
Weirauch et al.(2014)
pTH8661
0.701
0.701
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr1P08230_001
B3
162
264
FRKTLTASDTSTHGCCSIPRRAAEKVFPPLDFSRDPPVQELIAKDLHGNEWKFRHTFRGQPKRHLLTIGWTLFVNAKRLVAGDSVIFIWYGYSELLLGVRRAQ
Links
Other
B3
family TFs
Other
Musa acuminata
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc12g006350.1
Solanum lycopersicum
Solyc12g006350.1
I
0.849
LjSGA_144865.1
Lotus japonicus
LjSGA_144865.1
I
0.805
Solyc12g006340.1
Solanum lycopersicum
Solyc12g006340.1
I
0.804
PGSC0003DMG400028826
Solanum tuberosum
PGSC0003DMG400028826
I
0.784
GLYMA02G45100
Glycine max
GLYMA02G45100
I
0.753
GLYMA14G03650
Glycine max
GLYMA14G03650
I
0.753
GRMZM2G073750
Zea mays
GRMZM2G073750
I
0.753
POPTR_0001s36900
Populus trichocarpa
POPTR_0001s36900
I
0.753
POPTR_0002s05590
Populus trichocarpa
POPTR_0002s05590
I
0.753
POPTR_0005s22930
Populus trichocarpa
POPTR_0005s22930
I
0.753
PRUPE_ppa001069mg
Prunus persica
PRUPE_ppa001069mg
I
0.753
Pm014818
Prunus mume
Pm014818
I
0.753
Ciclev10014200m.g
Citrus clementina
Ciclev10014200m.g
I
0.753
Eucgr.A02065
Eucalyptus grandis
Eucgr.A02065
I
0.753
evm.TU.supercontig_17.53
Carica papaya
evm.TU.supercontig_17.53
I
0.753
gene22728-v1.0-hybrid
Fragaria vesca
gene22728-v1.0-hybrid
I
0.753
MDP0000153538
Malus domestica
MDP0000153538
I
0.753
MDP0000319957
Malus domestica
MDP0000319957
I
0.753
orange1.1g002390m.g
Citrus sinensis
orange1.1g002390m.g
I
0.753
ARF6
Arabidopsis thaliana
AT1G30330
I
0.742
Bo5g062810
Brassica oleracea
Bo5g062810
I
0.742
Bo6g099440
Brassica oleracea
Bo6g099440
I
0.742
Bra004125
Brassica rapa
Bra004125
I
0.742
ARF6
Arabidopsis lyrata
fgenesh2_kg.1__3210__AT1G30330.2
I
0.742
GRMZM2G035405
Zea mays
GRMZM2G035405
I
0.742
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.742
GSMUA_Achr5G02450_001
Musa acuminata
GSMUA_Achr5G02450_001
I
0.742
GSMUA_Achr5G26580_001
Musa acuminata
GSMUA_Achr5G26580_001
I
0.742
Solyc02g037530.2
Solanum lycopersicum
Solyc02g037530.2
I
0.742
VIT_12s0028g01170
Vitis vinifera
VIT_12s0028g01170
I
0.742
mgf007038m
Mimulus guttatus
mgf007038m
I
0.742
Bostr.15697s0332
Boechera stricta
Bostr.15697s0332
I
0.742
Cagra.1508s0171
Capsella grandiflora
Cagra.1508s0171
I
0.742
Carubv10008239m.g
Capsella rubella
Carubv10008239m.g
I
0.742
Gorai.006G008700
Gossypium raimondii
Gorai.006G008700
I
0.742
SapurV1A.0076s0280
Salix purpurea
SapurV1A.0076s0280
I
0.742
Thhalv10006747m.g
Eutrema salsugineum
Thhalv10006747m.g
I
0.742
PK27862.1
Cannabis sativa
PK27862.1
I
0.742
ARF17
Oryza indica
BGIOSGA020682
I
0.735
LPERR06G20540
Leersia perrieri
LPERR06G20540
I
0.735
OB02G14210
Oryza brachyantha
OB02G14210
I
0.735
OB06G32420
Oryza brachyantha
OB06G32420
I
0.735
OBART06G24660
Oryza barthii
OBART06G24660
I
0.735
OGLUM06G26000
Oryza glumaepatula
OGLUM06G26000
I
0.735
OLONG_018268
Oryza longistaminata
OLONG_018268
I
0.735
OMERI06G24880
Oryza meridionalis
OMERI06G24880
I
0.735
ONIVA02G35510
Oryza nivara
ONIVA02G35510
I
0.735
OPUNC06G22430
Oryza punctata
OPUNC06G22430
I
0.735
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.735
ARF17
Oryza sativa
OS06G0677800
I
0.735
PGSC0003DMG400015919
Solanum tuberosum
PGSC0003DMG400015919
I
0.735
Si005802m.g
Setaria italica
Si005802m.g
I
0.735
Si016262m.g
Setaria italica
Si016262m.g
I
0.735
mgf003543m
Mimulus guttatus
mgf003543m
I
0.735
Pavir.Aa03303
Panicum virgatum
Pavir.Aa03303
I
0.735
Pavir.Ab00451
Panicum virgatum
Pavir.Ab00451
I
0.735
Pavir.Da00065
Panicum virgatum
Pavir.Da00065
I
0.735
Pavir.Db00366
Panicum virgatum
Pavir.Db00366
I
0.735
VIT_03s0167g00010
Vitis vinifera
VIT_03s0167g00010
I
0.734
Bo3g148950
Brassica oleracea
Bo3g148950
I
0.732
Bra010776
Brassica rapa
Bra010776
I
0.732
GSMUA_Achr11G18520_001
Musa acuminata
GSMUA_Achr11G18520_001
I
0.732
GSMUA_Achr6G19850_001
Musa acuminata
GSMUA_Achr6G19850_001
I
0.732
Thhalv10018139m.g
Eutrema salsugineum
Thhalv10018139m.g
I
0.732
Traes_7AL_1415D04BF
Triticum aestivum
Traes_7AL_1415D04BF
I
0.729
MLOC_66152
Hordeum vulgare
MLOC_66152
I
0.726
ARF6
Oryza indica
BGIOSGA007604
I
0.724
BGIOSGA035840
Oryza indica
BGIOSGA035840
I
0.724
BRADI1G32547
Brachypodium distachyon
BRADI1G32547
I
0.724
GLYMA13G29320
Glycine max
GLYMA13G29320
I
0.724
GLYMA15G09750
Glycine max
GLYMA15G09750
I
0.724
GRMZM2G028980
Zea mays
GRMZM2G028980
I
0.724
LPERR02G04280
Leersia perrieri
LPERR02G04280
I
0.724
LPERR12G15750
Leersia perrieri
LPERR12G15750
I
0.724
MLOC_58330
Hordeum vulgare
MLOC_58330
I
0.724
MTR_2g018690
Medicago truncatula
MTR_2g018690
I
0.724
OB12G25550
Oryza brachyantha
OB12G25550
I
0.724
OBART02G04960
Oryza barthii
OBART02G04960
I
0.724
OBART12G18720
Oryza barthii
OBART12G18720
I
0.724
OGLUM02G04770
Oryza glumaepatula
OGLUM02G04770
I
0.724
OGLUM12G20370
Oryza glumaepatula
OGLUM12G20370
I
0.724
OLONG_020465
Oryza longistaminata
OLONG_020465
I
0.724
OLONG_025769
Oryza longistaminata
OLONG_025769
I
0.724
OMERI02G05780
Oryza meridionalis
OMERI02G05780
I
0.724
OMERI12G13970
Oryza meridionalis
OMERI12G13970
I
0.724
ONIVA02G05150
Oryza nivara
ONIVA02G05150
I
0.724
ONIVA12G17670
Oryza nivara
ONIVA12G17670
I
0.724
OPUNC02G04120
Oryza punctata
OPUNC02G04120
I
0.724
OPUNC12G16920
Oryza punctata
OPUNC12G16920
I
0.724
ORGLA02G0045800
Oryza glaberrima
ORGLA02G0045800
I
0.724
ORGLA12G0159700
Oryza glaberrima
ORGLA12G0159700
I
0.724
ORUFI02G05060
Oryza rufipogon
ORUFI02G05060
I
0.724
ORUFI12G20920
Oryza rufipogon
ORUFI12G20920
I
0.724
ARF6
Oryza sativa
OS02G0164900
I
0.724
ARF25
Oryza sativa
OS12G0613700
I
0.724
Sb04g004430
Sorghum bicolor
Sb04g004430
I
0.724
Sb10g027220
Sorghum bicolor
Sb10g027220
I
0.724
Solyc07g043620.2
Solanum lycopersicum
Solyc07g043620.2
I
0.724
Traes_7BL_66296695F
Triticum aestivum
Traes_7BL_66296695F
I
0.724
Traes_7DL_C89614A4D
Triticum aestivum
Traes_7DL_C89614A4D
I
0.724
Cla009963
Citrullus lanatus
Cla009963
I
0.724
Cucsa.047990
Cucumis sativus
Cucsa.047990
I
0.724
Eucgr.D00264
Eucalyptus grandis
Eucgr.D00264
I
0.724
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.722
TCM_029410
Theobroma cacao
TCM_029410
I
0.722
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.722
Pm010467
Prunus mume
Pm010467
I
0.722
29599.m000177
Ricinus communis
29599.m000177
I
0.722
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.722
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.722
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.722
MDP0000268306
Malus domestica
MDP0000268306
I
0.722
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.722
PK26077.1
Cannabis sativa
PK26077.1
I
0.722
AMTR_s00029p00157690
Amborella trichopoda
AMTR_s00029p00157690
I
0.714
AMTR_s00092p00072950
Amborella trichopoda
AMTR_s00092p00072950
I
0.714
BRADI3G04920
Brachypodium distachyon
BRADI3G04920
I
0.714
F775_09040
Aegilops tauschii
F775_09040
I
0.714
F775_09991
Aegilops tauschii
F775_09991
I
0.714
GLYMA05G27580
Glycine max
GLYMA05G27580
I
0.714
GLYMA08G10550
Glycine max
GLYMA08G10550
I
0.714
GSMUA_Achr3G23290_001
Musa acuminata
GSMUA_Achr3G23290_001
I
0.714
GSMUA_Achr5G00590_001
Musa acuminata
GSMUA_Achr5G00590_001
I
0.714
MLOC_63938
Hordeum vulgare
MLOC_63938
I
0.714
Si021157m.g
Setaria italica
Si021157m.g
I
0.714
TCM_001906
Theobroma cacao
TCM_001906
I
0.714
Traes_5AS_A86138871
Triticum aestivum
Traes_5AS_A86138871
I
0.714
Traes_5BS_3F6023CD6
Triticum aestivum
Traes_5BS_3F6023CD6
I
0.714
Traes_5DS_A71D29AE1
Triticum aestivum
Traes_5DS_A71D29AE1
I
0.714
Traes_6AS_10D92215D
Triticum aestivum
Traes_6AS_10D92215D
I
0.714
Traes_6BS_BD894AD26
Triticum aestivum
Traes_6BS_BD894AD26
I
0.714
Traes_6DS_F95C12EBB
Triticum aestivum
Traes_6DS_F95C12EBB
I
0.714
TRIUR3_10132
Triticum urartu
TRIUR3_10132
I
0.714
TRIUR3_28948
Triticum urartu
TRIUR3_28948
I
0.714
Ciclev10014198m.g
Citrus clementina
Ciclev10014198m.g
I
0.714
Gorai.011G048200
Gossypium raimondii
Gorai.011G048200
I
0.714
Lus10017640.g
Linum usitatissimum
Lus10017640.g
I
0.714
Lus10017641.g
Linum usitatissimum
Lus10017641.g
I
0.714
Lus10033597.g
Linum usitatissimum
Lus10033597.g
I
0.714
Lus10033598.g
Linum usitatissimum
Lus10033598.g
I
0.714
MDP0000232417
Malus domestica
MDP0000232417
I
0.714
orange1.1g002624m.g
Citrus sinensis
orange1.1g002624m.g
I
0.714
Pavir.Ca02838
Panicum virgatum
Pavir.Ca02838
I
0.714
Pavir.Cb00027
Panicum virgatum
Pavir.Cb00027
I
0.714
SapurV1A.0289s0180
Salix purpurea
SapurV1A.0289s0180
I
0.714
Cucsa.117420
Cucumis sativus
Cucsa.117420
I
0.712
LjSGA_022975.2
Lotus japonicus
LjSGA_022975.2
I
0.712
GRMZM2G081158
Zea mays
GRMZM2G081158
I
0.711
MTR_5g076270
Medicago truncatula
MTR_5g076270
I
0.711
Sb08g021460
Sorghum bicolor
Sb08g021460
I
0.711
Cla019844
Citrullus lanatus
Cla019844
I
0.711
29769.m000463
Ricinus communis
29769.m000463
I
0.711
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.711
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.711
cassava30265.valid.m1
Manihot esculenta
cassava30265.valid.m1
I
0.711
cassava30266.valid.m1
Manihot esculenta
cassava30266.valid.m1
I
0.711
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.711
cassava35541.valid.m1
Manihot esculenta
cassava35541.valid.m1
I
0.711
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.711
mgf005961m
Mimulus guttatus
mgf005961m
I
0.711
Aquca_002_01425
Aquilegia coerulea
Aquca_002_01425
I
0.711
Lus10007386.g
Linum usitatissimum
Lus10007386.g
I
0.711
Lus10010969.g
Linum usitatissimum
Lus10010969.g
I
0.711
Lus10031354.g
Linum usitatissimum
Lus10031354.g
I
0.711
SapurV1A.4298s0010
Salix purpurea
SapurV1A.4298s0010
I
0.709
BRADI4G01730
Brachypodium distachyon
BRADI4G01730
I
0.704
GLYMA02G40650
Glycine max
GLYMA02G40650
I
0.704
GLYMA11G31940
Glycine max
GLYMA11G31940
I
0.704
GLYMA14G38940
Glycine max
GLYMA14G38940
I
0.704
GLYMA18G05330
Glycine max
GLYMA18G05330
I
0.704
MTR_3g064050
Medicago truncatula
MTR_3g064050
I
0.704
POPTR_0017s01870
Populus trichocarpa
POPTR_0017s01870
I
0.704
TCM_017488
Theobroma cacao
TCM_017488
I
0.704
Ca_08872
Cicer arietinum
Ca_08872
I
0.704
Ca_15694
Cicer arietinum
Ca_15694
I
0.704
Aquca_022_00246
Aquilegia coerulea
Aquca_022_00246
I
0.704
Bostr.9638s0030
Boechera stricta
Bostr.9638s0030
I
0.704
Cagra.6767s0001
Capsella grandiflora
Cagra.6767s0001
I
0.704
Carubv10004139m.g
Capsella rubella
Carubv10004139m.g
I
0.704
Ciclev10011065m.g
Citrus clementina
Ciclev10011065m.g
I
0.704
gene31631-v1.0-hybrid
Fragaria vesca
gene31631-v1.0-hybrid
I
0.704
Gorai.001G204500
Gossypium raimondii
Gorai.001G204500
I
0.704
Gorai.008G054600
Gossypium raimondii
Gorai.008G054600
I
0.704
Gorai.008G097200
Gossypium raimondii
Gorai.008G097200
I
0.704
Lus10020804.g
Linum usitatissimum
Lus10020804.g
I
0.704
orange1.1g003544m.g
Citrus sinensis
orange1.1g003544m.g
I
0.704
SapurV1A.0147s0210
Salix purpurea
SapurV1A.0147s0210
I
0.704
Bo4g136370
Brassica oleracea
Bo4g136370
I
0.701
Bra028110
Brassica rapa
Bra028110
I
0.701
SapurV1A.0355s0030
Salix purpurea
SapurV1A.0355s0030
I
0.701
Ca_00467
Cicer arietinum
Ca_00467
I
0.700