CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART02G20600
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART02G20600
T019972_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART02G20600.1
B3
128
229
FCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRL
OBART02G20600.1
B3
577
623
CKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVK
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008429
Oryza indica
BGIOSGA008429
N
1.000
OLONG_012362
Oryza longistaminata
OLONG_012362
N
1.000
OMERI02G20310
Oryza meridionalis
OMERI02G20310
N
1.000
ONIVA02G22590
Oryza nivara
ONIVA02G22590
N
1.000
OPUNC02G18520
Oryza punctata
OPUNC02G18520
N
1.000
ORGLA02G0176700
Oryza glaberrima
ORGLA02G0176700
N
1.000
ORUFI02G21640
Oryza rufipogon
ORUFI02G21640
N
1.000
ARF7
Oryza sativa
OS02G0557200
N
1.000
OGLUM02G20880
Oryza glumaepatula
OGLUM02G20880
N
0.949
VIT_18s0089g00910
Vitis vinifera
VIT_18s0089g00910
N
0.919
Sb04g022830
Sorghum bicolor
Sb04g022830
N
0.905
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.859
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
0.851
TCM_027113
Theobroma cacao
TCM_027113
I
0.843
Traes_2AL_89543BA1A
Triticum aestivum
Traes_2AL_89543BA1A
N
0.831
TRIUR3_33501
Triticum urartu
TRIUR3_33501
N
0.831
Cucsa.183410
Cucumis sativus
Cucsa.183410
N
0.831
LPERR02G16580
Leersia perrieri
LPERR02G16580
N
0.821
Traes_2DL_A86E54838
Triticum aestivum
Traes_2DL_A86E54838
N
0.819
Cla001927
Citrullus lanatus
Cla001927
N
0.816
Ciclev10000491m.g
Citrus clementina
Ciclev10000491m.g
N
0.816
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.809
cassava11453.m1
Manihot esculenta
cassava11453.m1
N
0.809
cassava11454.m1
Manihot esculenta
cassava11454.m1
N
0.809
cassava11455.m1
Manihot esculenta
cassava11455.m1
N
0.809
cassava11456.m1
Manihot esculenta
cassava11456.m1
N
0.809
cassava7098.valid.m1
Manihot esculenta
cassava7098.valid.m1
N
0.809
cassava7099.valid.m1
Manihot esculenta
cassava7099.valid.m1
N
0.809
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.801
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.801
GLYMA12G28550
Glycine max
GLYMA12G28550
N
0.787
Gorai.011G091100
Gossypium raimondii
Gorai.011G091100
N
0.787
29609.m000587
Ricinus communis
29609.m000587
N
0.784
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.783
Bo1g090350
Brassica oleracea
Bo1g090350
N
0.779
Bra035427
Brassica rapa
Bra035427
N
0.779
GLYMA07G40270
Glycine max
GLYMA07G40270
N
0.779
Thhalv10023326m.g
Eutrema salsugineum
Thhalv10023326m.g
N
0.779
mgf006427m
Mimulus guttatus
mgf006427m
N
0.775
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.775
Bo4g083590
Brassica oleracea
Bo4g083590
N
0.765
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.759
GSMUA_Achr2G19760_001
Musa acuminata
GSMUA_Achr2G19760_001
N
0.757
MTR_8g027440
Medicago truncatula
MTR_8g027440
N
0.757
29742.m001397
Ricinus communis
29742.m001397
N
0.757
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.752
AMTR_s00021p00221770
Amborella trichopoda
AMTR_s00021p00221770
N
0.750
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.745
Cla015243
Citrullus lanatus
Cla015243
N
0.735
Cagra.0996s0001
Capsella grandiflora
Cagra.0996s0001
N
0.729
Carubv10022415m.g
Capsella rubella
Carubv10022415m.g
N
0.729
Carubv10006513m.g
Capsella rubella
Carubv10006513m.g
N
0.728
Aquca_100_00036
Aquilegia coerulea
Aquca_100_00036
N
0.721
Bostr.10040s0256
Boechera stricta
Bostr.10040s0256
N
0.719
ARF1
Arabidopsis thaliana
AT1G59750
N
0.717
ARF1
Arabidopsis lyrata
fgenesh2_kg.2__468__AT1G59750.1
N
0.705