CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART12G03490
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART12G03490
T020034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART12G03490.1
B3
36
142
FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGGDSGEKGLLLSFEDESGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGLGAADRLFIGCRRRG
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
141 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G36090
Glycine max
GLYMA02G36090
I
0.792
GLYMA10G08871
Glycine max
GLYMA10G08871
I
0.802
GSMUA_Achr9G02600_001
Musa acuminata
GSMUA_Achr9G02600_001
I
0.752
POPTR_0014s10290
Populus trichocarpa
POPTR_0014s10290
I
0.703
PRUPE_ppa019539mg
Prunus persica
PRUPE_ppa019539mg
I
0.798
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
0.707
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.753
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.786
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
0.914
Ca_25633
Cicer arietinum
Ca_25633
I
0.772
Cla017937
Citrullus lanatus
Cla017937
I
0.782
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
0.772
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
0.752
Cagra.2117s0038
Capsella grandiflora
Cagra.2117s0038
I
0.713
Carubv10001689m.g
Capsella rubella
Carubv10001689m.g
I
0.713
Ciclev10012008m.g
Citrus clementina
Ciclev10012008m.g
I
0.778
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
0.802
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
0.782
Gorai.002G237900
Gossypium raimondii
Gorai.002G237900
I
0.733
orange1.1g019261m.g
Citrus sinensis
orange1.1g019261m.g
I
0.778
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
0.713
SapurV1A.0162s0420
Salix purpurea
SapurV1A.0162s0420
I
0.703
Thhalv10015675m.g
Eutrema salsugineum
Thhalv10015675m.g
I
0.723
PK04952.1
Cannabis sativa
PK04952.1
I
0.772
ARF31
Arabidopsis thaliana
AT2G36080
N
0.772
AT3G11580
Arabidopsis thaliana
AT3G11580
N
0.723
AT5G06250
Arabidopsis thaliana
AT5G06250
N
0.723
BGIOSGA011738
Oryza indica
BGIOSGA011738
N
0.703
BGIOSGA034469
Oryza indica
BGIOSGA034469
N
0.802
BGIOSGA036599
Oryza indica
BGIOSGA036599
N
1.000
Bo01079s020
Brassica oleracea
Bo01079s020
N
0.772
Bo3g003800
Brassica oleracea
Bo3g003800
N
0.713
Bo3g064320
Brassica oleracea
Bo3g064320
N
0.713
Bo4g035110
Brassica oleracea
Bo4g035110
N
0.762
Bo5g136360
Brassica oleracea
Bo5g136360
N
0.733
Bo9g176470
Brassica oleracea
Bo9g176470
N
0.713
Bra001411
Brassica rapa
Bra001411
N
0.713
Bra005301
Brassica rapa
Bra005301
N
0.762
Bra005886
Brassica rapa
Bra005886
N
0.713
Bra017262
Brassica rapa
Bra017262
N
0.772
Bra034828
Brassica rapa
Bra034828
N
0.733
BRADI4G25170
Brachypodium distachyon
BRADI4G25170
N
0.822
BRADI4G42167
Brachypodium distachyon
BRADI4G42167
N
0.788
F775_02500
Aegilops tauschii
F775_02500
N
0.812
F775_31255
Aegilops tauschii
F775_31255
N
0.743
fgenesh2_kg.6__566__AT5G06250.2
Arabidopsis lyrata
fgenesh2_kg.6__566__AT5G06250.2
N
0.723
GLYMA03G35700
Glycine max
GLYMA03G35700
N
0.743
GLYMA19G38340
Glycine max
GLYMA19G38340
N
0.743
GRMZM2G142999
Zea mays
GRMZM2G142999
N
0.717
GRMZM2G328742
Zea mays
GRMZM2G328742
N
0.740
GRMZM5G805685
Zea mays
GRMZM5G805685
N
0.743
GSMUA_Achr3G19210_001
Musa acuminata
GSMUA_Achr3G19210_001
N
0.772
GSMUA_Achr6G13140_001
Musa acuminata
GSMUA_Achr6G13140_001
N
0.762
GSMUA_Achr6G35600_001
Musa acuminata
GSMUA_Achr6G35600_001
N
0.812
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
0.703
LPERR11G03050
Leersia perrieri
LPERR11G03050
N
0.881
LPERR12G03290
Leersia perrieri
LPERR12G03290
N
0.960
MLOC_11014
Hordeum vulgare
MLOC_11014
N
0.812
MLOC_56530
Hordeum vulgare
MLOC_56530
N
0.798
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
0.752
MTR_7g105370
Medicago truncatula
MTR_7g105370
N
0.762
OB03G11610
Oryza brachyantha
OB03G11610
N
0.703
OB10G24100
Oryza brachyantha
OB10G24100
N
0.705
OB11G12920
Oryza brachyantha
OB11G12920
N
0.782
OB12G13420
Oryza brachyantha
OB12G13420
N
0.851
OBART03G01650
Oryza barthii
OBART03G01650
N
0.703
OBART11G03590
Oryza barthii
OBART11G03590
N
0.802
OGLUM03G01630
Oryza glumaepatula
OGLUM03G01630
N
0.703
OGLUM11G03240
Oryza glumaepatula
OGLUM11G03240
N
0.802
OGLUM12G04180
Oryza glumaepatula
OGLUM12G04180
N
1.000
OLONG_005139
Oryza longistaminata
OLONG_005139
N
0.802
OMERI03G01600
Oryza meridionalis
OMERI03G01600
N
0.703
OMERI11G03310
Oryza meridionalis
OMERI11G03310
N
0.812
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
0.871
ONIVA02G30750
Oryza nivara
ONIVA02G30750
N
0.703
ONIVA07G22860
Oryza nivara
ONIVA07G22860
N
0.802
ONIVA12G03130
Oryza nivara
ONIVA12G03130
N
1.000
OPUNC03G01540
Oryza punctata
OPUNC03G01540
N
0.703
OPUNC11G03320
Oryza punctata
OPUNC11G03320
N
0.802
OPUNC12G03300
Oryza punctata
OPUNC12G03300
N
0.842
ORGLA03G0014300
Oryza glaberrima
ORGLA03G0014300
N
0.703
ORGLA11G0033600
Oryza glaberrima
ORGLA11G0033600
N
0.802
ORGLA12G0033700
Oryza glaberrima
ORGLA12G0033700
N
1.000
ORUFI11G03500
Oryza rufipogon
ORUFI11G03500
N
0.802
ORUFI12G03970
Oryza rufipogon
ORUFI12G03970
N
1.000
OS03G0120900
Oryza sativa
OS03G0120900
N
0.703
OS11G0156000
Oryza sativa
OS11G0156000
N
0.802
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
0.752
PGSC0003DMG400028159
Solanum tuberosum
PGSC0003DMG400028159
N
0.743
POPTR_0002s18260
Populus trichocarpa
POPTR_0002s18260
N
0.703
POPTR_0006s22460
Populus trichocarpa
POPTR_0006s22460
N
0.772
POPTR_0016s07540
Populus trichocarpa
POPTR_0016s07540
N
0.782
Sb05g003450
Sorghum bicolor
Sb05g003450
N
0.822
Sb08g003550
Sorghum bicolor
Sb08g003550
N
0.891
scaffold_301330.1
Arabidopsis lyrata
scaffold_301330.1
N
0.723
scaffold_402221.1
Arabidopsis lyrata
scaffold_402221.1
N
0.772
Si010849m.g
Setaria italica
Si010849m.g
N
0.921
Si027632m.g
Setaria italica
Si027632m.g
N
0.812
Si039972m.g
Setaria italica
Si039972m.g
N
0.713
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
0.752
Solyc10g083210.1
Solanum lycopersicum
Solyc10g083210.1
N
0.743
TCM_022729
Theobroma cacao
TCM_022729
N
0.758
Traes_2AL_25382F498
Triticum aestivum
Traes_2AL_25382F498
N
0.869
Traes_2BL_5ECD53274
Triticum aestivum
Traes_2BL_5ECD53274
N
0.778
Traes_2DL_2128A95BD
Triticum aestivum
Traes_2DL_2128A95BD
N
0.768
Traes_4AL_4F2E6EF28
Triticum aestivum
Traes_4AL_4F2E6EF28
N
0.812
Traes_4BS_5FECB39FA
Triticum aestivum
Traes_4BS_5FECB39FA
N
0.812
Traes_4DS_E6210A614
Triticum aestivum
Traes_4DS_E6210A614
N
0.812
Traes_5BL_B98E347A8
Triticum aestivum
Traes_5BL_B98E347A8
N
0.772
Traes_5DL_CACDF70D6
Triticum aestivum
Traes_5DL_CACDF70D6
N
0.772
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N
0.812
Ca_00826
Cicer arietinum
Ca_00826
N
0.762
30032.m000462
Ricinus communis
30032.m000462
N
0.782
cassava19218.valid.m1
Manihot esculenta
cassava19218.valid.m1
N
0.792
cassava3990.m1
Manihot esculenta
cassava3990.m1
N
0.752
mgf018965m
Mimulus guttatus
mgf018965m
N
0.737
mgf019085m
Mimulus guttatus
mgf019085m
N
0.762
Bostr.13129s0349
Boechera stricta
Bostr.13129s0349
N
0.703
Bostr.19424s1090
Boechera stricta
Bostr.19424s1090
N
0.723
Bostr.23794s0488
Boechera stricta
Bostr.23794s0488
N
0.772
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
0.772
Cagra.1655s0012
Capsella grandiflora
Cagra.1655s0012
N
0.723
Carubv10014376m.g
Capsella rubella
Carubv10014376m.g
N
0.723
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
0.772
Eucgr.A02625
Eucalyptus grandis
Eucgr.A02625
N
0.723
Gorai.006G152400
Gossypium raimondii
Gorai.006G152400
N
0.743
Gorai.009G399000
Gossypium raimondii
Gorai.009G399000
N
0.772
Lus10021326.g
Linum usitatissimum
Lus10021326.g
N
0.752
MDP0000229742
Malus domestica
MDP0000229742
N
0.752
MDP0000288808
Malus domestica
MDP0000288808
N
0.733
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
0.812
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
0.822
Pavir.Ha01761
Panicum virgatum
Pavir.Ha01761
N
0.822
Pavir.Hb01814
Panicum virgatum
Pavir.Hb01814
N
0.822
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
0.737
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
0.772
SapurV1A.1211s0020
Salix purpurea
SapurV1A.1211s0020
N
0.762
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
0.772
Thhalv10017156m.g
Eutrema salsugineum
Thhalv10017156m.g
N
0.772
Thhalv10021305m.g
Eutrema salsugineum
Thhalv10021305m.g
N
0.723
LjSGA_011266.1
Lotus japonicus
LjSGA_011266.1
N
0.733