CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G13560
(
Oryza glumaepatula
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OGLUM12G13560
T020123_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G13560.1
B3
147
249
FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAM
OGLUM12G13560.1
B3
740
787
IAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPWNEFCNMVH
Links
Other
B3
family TFs
Other
Oryza glumaepatula
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA036199
Oryza indica
BGIOSGA036199
N
1.000
OBART12G11990
Oryza barthii
OBART12G11990
N
1.000
OLONG_019549
Oryza longistaminata
OLONG_019549
N
1.000
OMERI12G08550
Oryza meridionalis
OMERI12G08550
N
1.000
ONIVA12G12070
Oryza nivara
ONIVA12G12070
N
1.000
OPUNC12G10620
Oryza punctata
OPUNC12G10620
N
1.000
ORGLA12G0109100
Oryza glaberrima
ORGLA12G0109100
N
1.000
ARF24
Oryza sativa
OS12G0479400
N
1.000
ORUFI12G13110
Oryza rufipogon
ORUFI12G13110
N
0.993
Si025988m.g
Setaria italica
Si025988m.g
N
0.929
Sb05g019540
Sorghum bicolor
Sb05g019540
N
0.917
MLOC_18401
Hordeum vulgare
MLOC_18401
N
0.901
LPERR01G37140
Leersia perrieri
LPERR01G37140
N
0.887
BRADI4G17410
Brachypodium distachyon
BRADI4G17410
I
0.882
OB01G51580
Oryza brachyantha
OB01G51580
N
0.879
OLONG_010675
Oryza longistaminata
OLONG_010675
N
0.879
TRAES3BF111600210CFD_g
Triticum aestivum
TRAES3BF111600210CFD_g
N
0.879
TRIUR3_02890
Triticum urartu
TRIUR3_02890
N
0.879
GSMUA_Achr6G16450_001
Musa acuminata
GSMUA_Achr6G16450_001
N
0.844
Aquca_100_00036
Aquilegia coerulea
Aquca_100_00036
N
0.844
PRUPE_ppa002394mg
Prunus persica
PRUPE_ppa002394mg
N
0.759
ARF1
Arabidopsis thaliana
AT1G59750
N
0.752
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.752
POPTR_0003s00890
Populus trichocarpa
POPTR_0003s00890
N
0.752
Solyc01g103050.2
Solanum lycopersicum
Solyc01g103050.2
N
0.752
29609.m000587
Ricinus communis
29609.m000587
N
0.752
Lus10007440.g
Linum usitatissimum
Lus10007440.g
N
0.752
SapurV1A.0225s0120
Salix purpurea
SapurV1A.0225s0120
N
0.752
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.750
AMTR_s00021p00221770
Amborella trichopoda
AMTR_s00021p00221770
N
0.745
Cla001927
Citrullus lanatus
Cla001927
N
0.735
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.723
Cagra.0996s0001
Capsella grandiflora
Cagra.0996s0001
N
0.716
Carubv10022415m.g
Capsella rubella
Carubv10022415m.g
N
0.716
Thhalv10023326m.g
Eutrema salsugineum
Thhalv10023326m.g
N
0.716
Bo1g090350
Brassica oleracea
Bo1g090350
N
0.709
Bra035427
Brassica rapa
Bra035427
N
0.709
ARF1
Arabidopsis lyrata
fgenesh2_kg.2__468__AT1G59750.1
N
0.709
mgf024961m
Mimulus guttatus
mgf024961m
N
0.709
Ciclev10000491m.g
Citrus clementina
Ciclev10000491m.g
N
0.709
Lus10024455.g
Linum usitatissimum
Lus10024455.g
N
0.709
mgf006427m
Mimulus guttatus
mgf006427m
N
0.704
Bo4g083590
Brassica oleracea
Bo4g083590
N
0.702
GLYMA07G40270
Glycine max
GLYMA07G40270
N
0.702
TCM_027113
Theobroma cacao
TCM_027113
I
0.702
29742.m001397
Ricinus communis
29742.m001397
N
0.702
cassava11453.m1
Manihot esculenta
cassava11453.m1
N
0.702
cassava11454.m1
Manihot esculenta
cassava11454.m1
N
0.702
cassava11455.m1
Manihot esculenta
cassava11455.m1
N
0.702
cassava11456.m1
Manihot esculenta
cassava11456.m1
N
0.702
cassava7098.valid.m1
Manihot esculenta
cassava7098.valid.m1
N
0.702
cassava7099.valid.m1
Manihot esculenta
cassava7099.valid.m1
N
0.702
Cucsa.183410
Cucumis sativus
Cucsa.183410
N
0.702