CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA04G29840
(
Oryza nivara
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ONIVA04G29840
T020321_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA04G29840.1
B3
122
228
YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMRDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA
Links
Other
B3
family TFs
Other
Oryza nivara
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014036
Oryza indica
BGIOSGA014036
N
0.990
OBART04G30660
Oryza barthii
OBART04G30660
N
0.990
OGLUM04G30530
Oryza glumaepatula
OGLUM04G30530
N
0.990
OMERI04G25770
Oryza meridionalis
OMERI04G25770
N
0.990
ORGLA04G0270000
Oryza glaberrima
ORGLA04G0270000
N
0.990
ARF13
Oryza sativa
OS04G0690600
N
0.990
ORUFI04G32360
Oryza rufipogon
ORUFI04G32360
N
0.984
OLONG_022935
Oryza longistaminata
OLONG_022935
N
0.905
OPUNC04G28180
Oryza punctata
OPUNC04G28180
N
0.859
Pavir.J37640
Panicum virgatum
Pavir.J37640
I
0.825
Pavir.J03524
Panicum virgatum
Pavir.J03524
I
0.808
LPERR04G26090
Leersia perrieri
LPERR04G26090
N
0.804
OB04G37650
Oryza brachyantha
OB04G37650
N
0.798
Si021833m.g
Setaria italica
Si021833m.g
N
0.765
BRADI5G27400
Brachypodium distachyon
BRADI5G27400
N
0.745
MDP0000256621
Malus domestica
MDP0000256621
I
0.722
chr1.LjT31L11.90.nd
Lotus japonicus
chr1.LjT31L11.90.nd
I
0.722
POPTR_0016s09150
Populus trichocarpa
POPTR_0016s09150
I
0.711
PRUPE_ppa003136mg
Prunus persica
PRUPE_ppa003136mg
I
0.711
Pm019126
Prunus mume
Pm019126
I
0.711
Lus10009770.g
Linum usitatissimum
Lus10009770.g
N
0.711
Lus10024753.g
Linum usitatissimum
Lus10024753.g
N
0.711
SapurV1A.0986s0010
Salix purpurea
SapurV1A.0986s0010
I
0.711
POPTR_0006s12930
Populus trichocarpa
POPTR_0006s12930
I
0.701
Solyc11g069500.1
Solanum lycopersicum
Solyc11g069500.1
I
0.701
29908.m005953
Ricinus communis
29908.m005953
I
0.701
evm.TU.supercontig_49.122
Carica papaya
evm.TU.supercontig_49.122
I
0.701
Gorai.009G241900
Gossypium raimondii
Gorai.009G241900
I
0.701