CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI01G09450
(
Oryza rufipogon
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
ORUFI01G09450
T020518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.701
0.701
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI01G09450.1
B3
60
162
FCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLV
Links
Other
B3
family TFs
Other
Oryza rufipogon
TFs
243 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA003093
Oryza indica
BGIOSGA003093
I
1.000
OBART01G08640
Oryza barthii
OBART01G08640
I
1.000
OGLUM01G09880
Oryza glumaepatula
OGLUM01G09880
I
1.000
OLONG_005875
Oryza longistaminata
OLONG_005875
I
1.000
OMERI01G08660
Oryza meridionalis
OMERI01G08660
I
1.000
OPUNC01G08500
Oryza punctata
OPUNC01G08500
I
1.000
ORGLA01G0077700
Oryza glaberrima
ORGLA01G0077700
I
1.000
ARF1
Oryza sativa
OS01G0236300
I
1.000
ONIVA01G11220
Oryza nivara
ONIVA01G11220
N
0.990
LPERR01G07680
Leersia perrieri
LPERR01G07680
I
0.979
OB01G18840
Oryza brachyantha
OB01G18840
N
0.979
Sb03g000530
Sorghum bicolor
Sb03g000530
I
0.979
Pavir.Ea00026
Panicum virgatum
Pavir.Ea00026
I
0.979
Pavir.Eb00045
Panicum virgatum
Pavir.Eb00045
I
0.969
F775_21871
Aegilops tauschii
F775_21871
I
0.938
MLOC_65945
Hordeum vulgare
MLOC_65945
I
0.938
TRAES3BF007300580CFD_g
Triticum aestivum
TRAES3BF007300580CFD_g
I
0.938
TRIUR3_28704
Triticum urartu
TRIUR3_28704
I
0.938
Traes_3AS_9594B1341
Triticum aestivum
Traes_3AS_9594B1341
N
0.915
GRMZM2G475263
Zea mays
GRMZM2G475263
N
0.908
Si000540m.g
Setaria italica
Si000540m.g
N
0.908
BRADI2G08120
Brachypodium distachyon
BRADI2G08120
N
0.878
Ciclev10019174m.g
Citrus clementina
Ciclev10019174m.g
I
0.835
orange1.1g005368m.g
Citrus sinensis
orange1.1g005368m.g
I
0.835
Gorai.007G109500
Gossypium raimondii
Gorai.007G109500
I
0.814
Solyc08g082630.2
Solanum lycopersicum
Solyc08g082630.2
I
0.784
Cucsa.303990
Cucumis sativus
Cucsa.303990
I
0.784
SapurV1A.0003s1010
Salix purpurea
SapurV1A.0003s1010
I
0.783
Cla011540
Citrullus lanatus
Cla011540
I
0.773
BGIOSGA016467
Oryza indica
BGIOSGA016467
I
0.771
OGLUM04G13380
Oryza glumaepatula
OGLUM04G13380
I
0.771
OMERI04G12260
Oryza meridionalis
OMERI04G12260
I
0.771
ONIVA04G11850
Oryza nivara
ONIVA04G11850
I
0.771
ORGLA04G0107000
Oryza glaberrima
ORGLA04G0107000
I
0.771
ORUFI04G14900
Oryza rufipogon
ORUFI04G14900
I
0.771
ARF9
Oryza sativa
OS04G0442000
I
0.771
OPUNC04G11520
Oryza punctata
OPUNC04G11520
I
0.763
Gorai.007G044900
Gossypium raimondii
Gorai.007G044900
I
0.763
Gorai.008G126200
Gossypium raimondii
Gorai.008G126200
I
0.763
GRMZM2G017187
Zea mays
GRMZM2G017187
I
0.760
GSMUA_Achr6G12780_001
Musa acuminata
GSMUA_Achr6G12780_001
I
0.760
chr1.LjT43L07.10.nd
Lotus japonicus
chr1.LjT43L07.10.nd
I
0.760
GLYMA03G41920
Glycine max
GLYMA03G41920
I
0.755
MTR_4g021580
Medicago truncatula
MTR_4g021580
I
0.755
VIT_15s0046g00290
Vitis vinifera
VIT_15s0046g00290
I
0.755
cassava29828.valid.m1
Manihot esculenta
cassava29828.valid.m1
I
0.755
mgf005549m
Mimulus guttatus
mgf005549m
I
0.755
Aquca_013_00067
Aquilegia coerulea
Aquca_013_00067
I
0.755
evm.TU.supercontig_96.40
Carica papaya
evm.TU.supercontig_96.40
I
0.755
MDP0000194603
Malus domestica
MDP0000194603
I
0.755
PK07332.1
Cannabis sativa
PK07332.1
I
0.755
AMTR_s00016p00168950
Amborella trichopoda
AMTR_s00016p00168950
I
0.753
ARF11
Arabidopsis thaliana
AT2G46530
I
0.753
GSMUA_Achr10G15100_001
Musa acuminata
GSMUA_Achr10G15100_001
I
0.753
MLOC_64596
Hordeum vulgare
MLOC_64596
I
0.753
OB04G20880
Oryza brachyantha
OB04G20880
I
0.753
TCM_005126
Theobroma cacao
TCM_005126
I
0.753
cassava43609.valid.m1
Manihot esculenta
cassava43609.valid.m1
I
0.753
Bostr.25993s0113
Boechera stricta
Bostr.25993s0113
I
0.753
Cagra.0050s0046
Capsella grandiflora
Cagra.0050s0046
I
0.753
Carubv10022841m.g
Capsella rubella
Carubv10022841m.g
I
0.753
evm.TU.supercontig_15.1
Carica papaya
evm.TU.supercontig_15.1
I
0.753
Sb06g017490
Sorghum bicolor
Sb06g017490
I
0.750
Si009558m.g
Setaria italica
Si009558m.g
I
0.750
Pavir.Ga01750
Panicum virgatum
Pavir.Ga01750
I
0.750
Pavir.Gb01617
Panicum virgatum
Pavir.Gb01617
I
0.750
Bra018098
Brassica rapa
Bra018098
I
0.745
Bra025779
Brassica rapa
Bra025779
I
0.745
GLYMA07G06060
Glycine max
GLYMA07G06060
I
0.745
GLYMA16G02650
Glycine max
GLYMA16G02650
I
0.745
GSMUA_AchrUn_randomG11300_001
Musa acuminata
GSMUA_AchrUn_randomG11300_001
I
0.745
PRUPE_ppa002230mg
Prunus persica
PRUPE_ppa002230mg
I
0.745
VIT_02s0025g01740
Vitis vinifera
VIT_02s0025g01740
I
0.745
Pm018352
Prunus mume
Pm018352
I
0.745
30068.m002516
Ricinus communis
30068.m002516
I
0.745
Cucsa.114840
Cucumis sativus
Cucsa.114840
I
0.745
Gorai.001G153900
Gossypium raimondii
Gorai.001G153900
I
0.745
Bo01141s010
Brassica oleracea
Bo01141s010
I
0.742
Bo3g039330
Brassica oleracea
Bo3g039330
I
0.742
Bra014419
Brassica rapa
Bra014419
I
0.742
BRADI5G10950
Brachypodium distachyon
BRADI5G10950
I
0.742
POPTR_0001s13110
Populus trichocarpa
POPTR_0001s13110
I
0.742
Traes_2BL_1AED96909
Triticum aestivum
Traes_2BL_1AED96909
I
0.742
30128.m008545
Ricinus communis
30128.m008545
I
0.742
Cucsa.078800
Cucumis sativus
Cucsa.078800
I
0.742
Eucgr.G00076
Eucalyptus grandis
Eucgr.G00076
I
0.742
PK02218.1
Cannabis sativa
PK02218.1
I
0.742
PDK_20s1869091g001
Phoenix dactylifera
PDK_20s1869091g001
I
0.742
Aquca_008_00175
Aquilegia coerulea
Aquca_008_00175
I
0.739
GRMZM2G137413
Zea mays
GRMZM2G137413
I
0.737
PGSC0003DMG400000118
Solanum tuberosum
PGSC0003DMG400000118
I
0.737
Si016562m.g
Setaria italica
Si016562m.g
I
0.737
Solyc01g096070.2
Solanum lycopersicum
Solyc01g096070.2
I
0.737
TCM_029792
Theobroma cacao
TCM_029792
I
0.736
ARF18
Arabidopsis thaliana
AT3G61830
I
0.735
Bo8g097320
Brassica oleracea
Bo8g097320
I
0.735
ARF18
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_5002633
I
0.735
POPTR_0001s10900
Populus trichocarpa
POPTR_0001s10900
I
0.735
POPTR_0002s17350
Populus trichocarpa
POPTR_0002s17350
I
0.735
POPTR_0003s14200
Populus trichocarpa
POPTR_0003s14200
I
0.735
PRUPE_ppa002617mg
Prunus persica
PRUPE_ppa002617mg
I
0.735
ARF11
Arabidopsis lyrata
scaffold_403621.1
I
0.735
Pm024149
Prunus mume
Pm024149
I
0.735
cassava42787.valid.m1
Manihot esculenta
cassava42787.valid.m1
I
0.735
cassava42788.valid.m1
Manihot esculenta
cassava42788.valid.m1
I
0.735
cassava42789.valid.m1
Manihot esculenta
cassava42789.valid.m1
I
0.735
cassava45422.m1
Manihot esculenta
cassava45422.m1
I
0.735
cassava45423.m1
Manihot esculenta
cassava45423.m1
I
0.735
cassava45424.m1
Manihot esculenta
cassava45424.m1
I
0.735
cassava45425.m1
Manihot esculenta
cassava45425.m1
I
0.735
cassava45426.m1
Manihot esculenta
cassava45426.m1
I
0.735
gene19138-v1.0-hybrid
Fragaria vesca
gene19138-v1.0-hybrid
I
0.735
Gorai.003G078000
Gossypium raimondii
Gorai.003G078000
I
0.735
Gorai.007G026900
Gossypium raimondii
Gorai.007G026900
I
0.735
Lus10023058.g
Linum usitatissimum
Lus10023058.g
I
0.735
Lus10032413.g
Linum usitatissimum
Lus10032413.g
I
0.735
MDP0000139073
Malus domestica
MDP0000139073
I
0.735
SapurV1A.0035s0230
Salix purpurea
SapurV1A.0035s0230
I
0.735
Thhalv10001365m.g
Eutrema salsugineum
Thhalv10001365m.g
I
0.735
LjSGA_059323.1
Lotus japonicus
LjSGA_059323.1
I
0.735
Bo4g008150
Brassica oleracea
Bo4g008150
I
0.732
Bra004530
Brassica rapa
Bra004530
I
0.732
GLYMA03G17450
Glycine max
GLYMA03G17450
I
0.732
OB01G35190
Oryza brachyantha
OB01G35190
I
0.732
POPTR_0003s16210
Populus trichocarpa
POPTR_0003s16210
I
0.732
Ca_21948
Cicer arietinum
Ca_21948
I
0.732
Aquca_003_00899
Aquilegia coerulea
Aquca_003_00899
I
0.732
SapurV1A.0499s0060
Salix purpurea
SapurV1A.0499s0060
I
0.732
PDK_20s1585531g001
Phoenix dactylifera
PDK_20s1585531g001
I
0.732
GSMUA_Achr10G16170_001
Musa acuminata
GSMUA_Achr10G16170_001
I
0.726
GSMUA_Achr6G29070_001
Musa acuminata
GSMUA_Achr6G29070_001
I
0.726
OB02G28170
Oryza brachyantha
OB02G28170
I
0.726
Pavir.Ab01961
Panicum virgatum
Pavir.Ab01961
I
0.726
GLYMA01G25270
Glycine max
GLYMA01G25270
I
0.724
PGSC0003DMG400012261
Solanum tuberosum
PGSC0003DMG400012261
I
0.724
TCM_008374
Theobroma cacao
TCM_008374
I
0.724
TCM_016500
Theobroma cacao
TCM_016500
I
0.724
Cla013021
Citrullus lanatus
Cla013021
I
0.724
Bostr.13158s0186
Boechera stricta
Bostr.13158s0186
I
0.724
Cagra.0483s0062
Capsella grandiflora
Cagra.0483s0062
I
0.724
Carubv10018954m.g
Capsella rubella
Carubv10018954m.g
I
0.724
SapurV1A.1529s0070
Salix purpurea
SapurV1A.1529s0070
I
0.724
Thhalv10005857m.g
Eutrema salsugineum
Thhalv10005857m.g
I
0.724
GLYMA16G00220
Glycine max
GLYMA16G00220
I
0.722
GRMZM2G378580
Zea mays
GRMZM2G378580
I
0.722
GRMZM2G702026
Zea mays
GRMZM2G702026
I
0.722
GSMUA_Achr4G10590_001
Musa acuminata
GSMUA_Achr4G10590_001
I
0.722
MTR_2g005240
Medicago truncatula
MTR_2g005240
I
0.722
POPTR_0004s23770
Populus trichocarpa
POPTR_0004s23770
I
0.722
ARF1
Vitis vinifera
VIT_12s0035g01800
I
0.722
cassava44131.valid.m1
Manihot esculenta
cassava44131.valid.m1
I
0.722
cassava44132.valid.m1
Manihot esculenta
cassava44132.valid.m1
I
0.722
cassava47296.m1
Manihot esculenta
cassava47296.m1
I
0.722
cassava47297.m1
Manihot esculenta
cassava47297.m1
I
0.722
cassava47298.m1
Manihot esculenta
cassava47298.m1
I
0.722
cassava47299.m1
Manihot esculenta
cassava47299.m1
I
0.722
cassava47300.m1
Manihot esculenta
cassava47300.m1
I
0.722
cassava47301.m1
Manihot esculenta
cassava47301.m1
I
0.722
Ciclev10019257m.g
Citrus clementina
Ciclev10019257m.g
I
0.722
Eucgr.D01764
Eucalyptus grandis
Eucgr.D01764
I
0.722
MDP0000929655
Malus domestica
MDP0000929655
I
0.722
orange1.1g005060m.g
Citrus sinensis
orange1.1g005060m.g
I
0.722
Pavir.Aa01676
Panicum virgatum
Pavir.Aa01676
I
0.722
SapurV1A.0422s0040
Salix purpurea
SapurV1A.0422s0040
I
0.722
PK12669.1
Cannabis sativa
PK12669.1
I
0.722
chr4.CM0175.280.nc
Lotus japonicus
chr4.CM0175.280.nc
I
0.722
LjSGA_022281.1
Lotus japonicus
LjSGA_022281.1
I
0.722
Ciclev10019131m.g
Citrus clementina
Ciclev10019131m.g
I
0.719
orange1.1g005491m.g
Citrus sinensis
orange1.1g005491m.g
I
0.719
AMTR_s00057p00141830
Amborella trichopoda
AMTR_s00057p00141830
I
0.714
GLYMA07G16170
Glycine max
GLYMA07G16170
I
0.714
GSMUA_Achr7G24330_001
Musa acuminata
GSMUA_Achr7G24330_001
I
0.714
POPTR_0012s10790
Populus trichocarpa
POPTR_0012s10790
I
0.714
POPTR_0014s09560
Populus trichocarpa
POPTR_0014s09560
I
0.714
VIT_01s0244g00150
Vitis vinifera
VIT_01s0244g00150
I
0.714
cassava37256.valid.m1
Manihot esculenta
cassava37256.valid.m1
I
0.714
Eucgr.B03551
Eucalyptus grandis
Eucgr.B03551
I
0.714
gene25123-v1.0-hybrid
Fragaria vesca
gene25123-v1.0-hybrid
I
0.714
Gorai.008G210200
Gossypium raimondii
Gorai.008G210200
I
0.714
SapurV1A.0013s0230
Salix purpurea
SapurV1A.0013s0230
I
0.714
PDK_20s1394651g001
Phoenix dactylifera
PDK_20s1394651g001
I
0.714
BGIOSGA001046
Oryza indica
BGIOSGA001046
I
0.711
GRMZM2G338259
Zea mays
GRMZM2G338259
I
0.711
GSMUA_Achr6G07390_001
Musa acuminata
GSMUA_Achr6G07390_001
I
0.711
GSMUA_Achr9G08310_001
Musa acuminata
GSMUA_Achr9G08310_001
I
0.711
LPERR01G22260
Leersia perrieri
LPERR01G22260
I
0.711
OBART01G26040
Oryza barthii
OBART01G26040
I
0.711
OGLUM01G29850
Oryza glumaepatula
OGLUM01G29850
I
0.711
OLONG_013033
Oryza longistaminata
OLONG_013033
I
0.711
OLONG_023172
Oryza longistaminata
OLONG_023172
I
0.711
OMERI01G23690
Oryza meridionalis
OMERI01G23690
I
0.711
ONIVA01G29290
Oryza nivara
ONIVA01G29290
I
0.711
OPUNC01G25930
Oryza punctata
OPUNC01G25930
I
0.711
ORGLA01G0213000
Oryza glaberrima
ORGLA01G0213000
I
0.711
ORUFI01G28960
Oryza rufipogon
ORUFI01G28960
I
0.711
OS01G0670800
Oryza sativa
OS01G0670800
I
0.711
PGSC0003DMG400020711
Solanum tuberosum
PGSC0003DMG400020711
I
0.711
Sb03g044630
Sorghum bicolor
Sb03g044630
I
0.711
Si000340m.g
Setaria italica
Si000340m.g
I
0.711
TCM_027113
Theobroma cacao
TCM_027113
I
0.711
Ca_23296
Cicer arietinum
Ca_23296
I
0.711
Cla019614
Citrullus lanatus
Cla019614
I
0.711
Pavir.Ea03860
Panicum virgatum
Pavir.Ea03860
I
0.711
Pavir.Eb03734
Panicum virgatum
Pavir.Eb03734
I
0.711
SapurV1A.0340s0160
Salix purpurea
SapurV1A.0340s0160
I
0.711
Cla000568
Citrullus lanatus
Cla000568
I
0.708
Cucsa.052860
Cucumis sativus
Cucsa.052860
I
0.708
Bo3g108130
Brassica oleracea
Bo3g108130
I
0.704
Bra010048
Brassica rapa
Bra010048
I
0.704
F775_31280
Aegilops tauschii
F775_31280
I
0.704
GLYMA04G37760
Glycine max
GLYMA04G37760
I
0.704
GLYMA05G38540
Glycine max
GLYMA05G38540
I
0.704
GLYMA06G17320
Glycine max
GLYMA06G17320
I
0.704
GLYMA18G40180
Glycine max
GLYMA18G40180
I
0.704
GRMZM2G116557
Zea mays
GRMZM2G116557
I
0.704
GSMUA_Achr10G12070_001
Musa acuminata
GSMUA_Achr10G12070_001
I
0.704
MTR_8g100050
Medicago truncatula
MTR_8g100050
I
0.704
POPTR_0015s11660
Populus trichocarpa
POPTR_0015s11660
I
0.704
Solyc03g118290.2
Solanum lycopersicum
Solyc03g118290.2
I
0.704
ARF2
Vitis vinifera
VIT_17s0000g00320
I
0.704
cassava17839.valid.m1
Manihot esculenta
cassava17839.valid.m1
I
0.704
cassava17840.valid.m1
Manihot esculenta
cassava17840.valid.m1
I
0.704
cassava42790.valid.m1
Manihot esculenta
cassava42790.valid.m1
I
0.704
Cucsa.156920
Cucumis sativus
Cucsa.156920
I
0.704
mgf006511m
Mimulus guttatus
mgf006511m
I
0.704
mgf015308m
Mimulus guttatus
mgf015308m
I
0.704
Ciclev10030696m.g
Citrus clementina
Ciclev10030696m.g
I
0.704
Eucgr.E00888
Eucalyptus grandis
Eucgr.E00888
I
0.704
gene06434-v1.0-hybrid
Fragaria vesca
gene06434-v1.0-hybrid
I
0.704
Gorai.001G054600
Gossypium raimondii
Gorai.001G054600
I
0.704
MDP0000258032
Malus domestica
MDP0000258032
I
0.704
MDP0000310875
Malus domestica
MDP0000310875
I
0.704
orange1.1g004792m.g
Citrus sinensis
orange1.1g004792m.g
I
0.704
PK16974.1
Cannabis sativa
PK16974.1
I
0.704
LjSGA_068216.1
Lotus japonicus
LjSGA_068216.1
I
0.704
GRMZM2G006042
Zea mays
GRMZM2G006042
I
0.701
MTR_7g062540
Medicago truncatula
MTR_7g062540
I
0.701
Si004598m.g
Setaria italica
Si004598m.g
I
0.701
Si021216m.g
Setaria italica
Si021216m.g
I
0.701
Ca_05681
Cicer arietinum
Ca_05681
I
0.701
mgf020855m
Mimulus guttatus
mgf020855m
I
0.701
Pavir.Cb00753
Panicum virgatum
Pavir.Cb00753
I
0.701
Pavir.J11622
Panicum virgatum
Pavir.J11622
I
0.701