CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARF13
(
Oryza sativa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OS04G0690600
T020650_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS04T0690600-01
B3
128
234
YAKQLTQSDANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA
Links
Other
B3
family TFs
Other
Oryza sativa
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA014036
Oryza indica
BGIOSGA014036
N
1.000
OBART04G30660
Oryza barthii
OBART04G30660
N
1.000
OGLUM04G30530
Oryza glumaepatula
OGLUM04G30530
N
1.000
OMERI04G25770
Oryza meridionalis
OMERI04G25770
N
1.000
ORGLA04G0270000
Oryza glaberrima
ORGLA04G0270000
N
1.000
ONIVA04G29840
Oryza nivara
ONIVA04G29840
N
0.990
OPUNC04G28180
Oryza punctata
OPUNC04G28180
N
0.869
OB04G37650
Oryza brachyantha
OB04G37650
N
0.798
Pavir.J03524
Panicum virgatum
Pavir.J03524
I
0.798
Pavir.J37640
Panicum virgatum
Pavir.J37640
I
0.798
LPERR04G26090
Leersia perrieri
LPERR04G26090
N
0.788
Si021833m.g
Setaria italica
Si021833m.g
N
0.747
BRADI5G27400
Brachypodium distachyon
BRADI5G27400
N
0.735
MDP0000256621
Malus domestica
MDP0000256621
I
0.722
chr1.LjT31L11.90.nd
Lotus japonicus
chr1.LjT31L11.90.nd
I
0.722
PRUPE_ppa003136mg
Prunus persica
PRUPE_ppa003136mg
I
0.711
Lus10009770.g
Linum usitatissimum
Lus10009770.g
N
0.711
Lus10024753.g
Linum usitatissimum
Lus10024753.g
N
0.711
POPTR_0006s12930
Populus trichocarpa
POPTR_0006s12930
I
0.701
29908.m005953
Ricinus communis
29908.m005953
I
0.701