CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb08g003550
(
Sorghum bicolor
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Sb08g003550
T021126_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb08g003550.1
B3
39
149
FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGNGAGDGSDKGLLLAFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVRFERVRGGLGTGDRLFICCRRRG
Links
Other
B3
family TFs
Other
Sorghum bicolor
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G36090
Glycine max
GLYMA02G36090
I
0.743
GLYMA10G08871
Glycine max
GLYMA10G08871
I
0.752
GSMUA_Achr9G02600_001
Musa acuminata
GSMUA_Achr9G02600_001
I
0.723
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
0.757
PRUPE_ppa019539mg
Prunus persica
PRUPE_ppa019539mg
I
0.768
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
0.759
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.730
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.786
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
0.857
Ca_25633
Cicer arietinum
Ca_25633
I
0.743
Cla017937
Citrullus lanatus
Cla017937
I
0.762
Cucsa.241440
Cucumis sativus
Cucsa.241440
I
0.752
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
0.733
Ciclev10012008m.g
Citrus clementina
Ciclev10012008m.g
I
0.747
evm.TU.contig_29173.1
Carica papaya
evm.TU.contig_29173.1
I
0.752
gene15627-v1.0-hybrid
Fragaria vesca
gene15627-v1.0-hybrid
I
0.752
orange1.1g019261m.g
Citrus sinensis
orange1.1g019261m.g
I
0.747
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
0.703
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
0.729
PK04952.1
Cannabis sativa
PK04952.1
I
0.752
ARF31
Arabidopsis thaliana
AT2G36080
N
0.772
BGIOSGA034469
Oryza indica
BGIOSGA034469
N
0.832
BGIOSGA036599
Oryza indica
BGIOSGA036599
N
0.891
Bo01079s020
Brassica oleracea
Bo01079s020
N
0.772
Bo4g035110
Brassica oleracea
Bo4g035110
N
0.762
Bra005301
Brassica rapa
Bra005301
N
0.762
Bra017262
Brassica rapa
Bra017262
N
0.772
BRADI4G25170
Brachypodium distachyon
BRADI4G25170
N
0.792
BRADI4G42167
Brachypodium distachyon
BRADI4G42167
N
0.798
F775_02500
Aegilops tauschii
F775_02500
N
0.782
F775_31255
Aegilops tauschii
F775_31255
N
0.806
GLYMA03G35700
Glycine max
GLYMA03G35700
N
0.713
GLYMA19G38340
Glycine max
GLYMA19G38340
N
0.713
GRMZM2G082227
Zea mays
GRMZM2G082227
N
0.713
GRMZM2G125095
Zea mays
GRMZM2G125095
N
0.703
GRMZM2G142999
Zea mays
GRMZM2G142999
N
0.747
GRMZM2G328742
Zea mays
GRMZM2G328742
N
0.760
GRMZM5G805685
Zea mays
GRMZM5G805685
N
0.772
GSMUA_Achr3G19210_001
Musa acuminata
GSMUA_Achr3G19210_001
N
0.733
GSMUA_Achr6G13140_001
Musa acuminata
GSMUA_Achr6G13140_001
N
0.723
GSMUA_Achr6G35600_001
Musa acuminata
GSMUA_Achr6G35600_001
N
0.762
LPERR11G03050
Leersia perrieri
LPERR11G03050
N
0.881
LPERR12G03290
Leersia perrieri
LPERR12G03290
N
0.881
MLOC_11014
Hordeum vulgare
MLOC_11014
N
0.782
MLOC_56530
Hordeum vulgare
MLOC_56530
N
0.808
MTR_1g058350
Medicago truncatula
MTR_1g058350
N
0.733
MTR_7g105370
Medicago truncatula
MTR_7g105370
N
0.733
OB11G12920
Oryza brachyantha
OB11G12920
N
0.822
OB12G13420
Oryza brachyantha
OB12G13420
N
0.822
OBART11G03590
Oryza barthii
OBART11G03590
N
0.832
OBART12G03490
Oryza barthii
OBART12G03490
N
0.891
OGLUM11G03240
Oryza glumaepatula
OGLUM11G03240
N
0.832
OGLUM12G04180
Oryza glumaepatula
OGLUM12G04180
N
0.891
OLONG_005139
Oryza longistaminata
OLONG_005139
N
0.832
OMERI10G13480
Oryza meridionalis
OMERI10G13480
N
0.703
OMERI11G03310
Oryza meridionalis
OMERI11G03310
N
0.822
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
0.822
ONIVA07G22860
Oryza nivara
ONIVA07G22860
N
0.832
ONIVA12G03130
Oryza nivara
ONIVA12G03130
N
0.891
OPUNC11G03320
Oryza punctata
OPUNC11G03320
N
0.812
OPUNC12G03300
Oryza punctata
OPUNC12G03300
N
0.792
ORGLA11G0033600
Oryza glaberrima
ORGLA11G0033600
N
0.832
ORGLA12G0033700
Oryza glaberrima
ORGLA12G0033700
N
0.891
ORUFI11G03500
Oryza rufipogon
ORUFI11G03500
N
0.832
ORUFI12G03970
Oryza rufipogon
ORUFI12G03970
N
0.891
OS11G0156000
Oryza sativa
OS11G0156000
N
0.832
PGSC0003DMG400008936
Solanum tuberosum
PGSC0003DMG400008936
N
0.723
POPTR_0006s22460
Populus trichocarpa
POPTR_0006s22460
N
0.743
POPTR_0016s07540
Populus trichocarpa
POPTR_0016s07540
N
0.752
PRUPE_ppa015999mg
Prunus persica
PRUPE_ppa015999mg
N
0.703
Sb01g030520
Sorghum bicolor
Sb01g030520
N
0.735
Sb05g003450
Sorghum bicolor
Sb05g003450
N
0.772
scaffold_402221.1
Arabidopsis lyrata
scaffold_402221.1
N
0.772
Si010849m.g
Setaria italica
Si010849m.g
N
0.960
Si027632m.g
Setaria italica
Si027632m.g
N
0.782
Solyc09g010230.1
Solanum lycopersicum
Solyc09g010230.1
N
0.733
TCM_022729
Theobroma cacao
TCM_022729
N
0.727
Traes_2AL_25382F498
Triticum aestivum
Traes_2AL_25382F498
N
0.879
Traes_2BL_5ECD53274
Triticum aestivum
Traes_2BL_5ECD53274
N
0.788
Traes_2DL_2128A95BD
Triticum aestivum
Traes_2DL_2128A95BD
N
0.778
Traes_4AL_4F2E6EF28
Triticum aestivum
Traes_4AL_4F2E6EF28
N
0.782
Traes_4BL_D9784B20C1
Triticum aestivum
Traes_4BL_D9784B20C1
N
0.703
Traes_4BS_5FECB39FA
Triticum aestivum
Traes_4BS_5FECB39FA
N
0.782
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
0.713
Traes_4DS_E6210A614
Triticum aestivum
Traes_4DS_E6210A614
N
0.782
Traes_5BL_B98E347A8
Triticum aestivum
Traes_5BL_B98E347A8
N
0.782
Traes_5DL_CACDF70D6
Triticum aestivum
Traes_5DL_CACDF70D6
N
0.782
VIT_08s0007g02810
Vitis vinifera
VIT_08s0007g02810
N
0.743
Ca_00826
Cicer arietinum
Ca_00826
N
0.733
Pm028725
Prunus mume
Pm028725
N
0.703
30032.m000462
Ricinus communis
30032.m000462
N
0.752
cassava19218.valid.m1
Manihot esculenta
cassava19218.valid.m1
N
0.752
cassava3990.m1
Manihot esculenta
cassava3990.m1
N
0.743
mgf018965m
Mimulus guttatus
mgf018965m
N
0.707
mgf019085m
Mimulus guttatus
mgf019085m
N
0.723
Bostr.23794s0488
Boechera stricta
Bostr.23794s0488
N
0.772
Cagra.0993s0119
Capsella grandiflora
Cagra.0993s0119
N
0.772
Carubv10023925m.g
Capsella rubella
Carubv10023925m.g
N
0.772
Gorai.006G152400
Gossypium raimondii
Gorai.006G152400
N
0.733
Gorai.009G399000
Gossypium raimondii
Gorai.009G399000
N
0.743
Lus10021326.g
Linum usitatissimum
Lus10021326.g
N
0.713
MDP0000229742
Malus domestica
MDP0000229742
N
0.752
MDP0000288808
Malus domestica
MDP0000288808
N
0.743
Pavir.Ca00165
Panicum virgatum
Pavir.Ca00165
N
0.861
Pavir.Cb02052
Panicum virgatum
Pavir.Cb02052
N
0.861
Pavir.Ha01761
Panicum virgatum
Pavir.Ha01761
N
0.782
Pavir.Hb01814
Panicum virgatum
Pavir.Hb01814
N
0.782
Pavir.J06582
Panicum virgatum
Pavir.J06582
N
0.713
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
0.705
Pavir.J35382
Panicum virgatum
Pavir.J35382
N
0.703
SapurV1A.0974s0140
Salix purpurea
SapurV1A.0974s0140
N
0.743
SapurV1A.1211s0020
Salix purpurea
SapurV1A.1211s0020
N
0.733
SapurV1A.1586s0010
Salix purpurea
SapurV1A.1586s0010
N
0.743
Thhalv10017156m.g
Eutrema salsugineum
Thhalv10017156m.g
N
0.762
LjSGA_011266.1
Lotus japonicus
LjSGA_011266.1
N
0.713