CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000497m.g
(
Setaria italica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Si000497m.g
T021254_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000497m
B3
532
633
LQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGISIPMEDIGTSRVWNMRYRFWPNNKSRMYLLENTGEFVRSNELQEGDFIVIYSDVKSGKYLIRGVKV
Links
Other
B3
family TFs
Other
Setaria italica
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30204.m001803
Ricinus communis
30204.m001803
N
0.897
ABI3
Arabidopsis thaliana
AT3G24650
N
0.887
ABI3
Vitis vinifera
VIT_07s0005g05400
N
0.897
ABI3
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_3002399
N
0.887
AMTR_s00049p00034730
Amborella trichopoda
AMTR_s00049p00034730
N
0.897
Aquca_108_00003
Aquilegia coerulea
Aquca_108_00003
N
0.887
BGIOSGA000276
Oryza indica
BGIOSGA000276
N
0.959
Bo3g083650
Brassica oleracea
Bo3g083650
N
0.876
Bostr.19424s0154
Boechera stricta
Bostr.19424s0154
N
0.887
Bra013248
Brassica rapa
Bra013248
N
0.876
BRADI2G58390
Brachypodium distachyon
BRADI2G58390
N
0.948
Cagra.2774s0002
Capsella grandiflora
Cagra.2774s0002
N
0.887
Carubv10016094m.g
Capsella rubella
Carubv10016094m.g
N
0.887
cassava2971.m1
Manihot esculenta
cassava2971.m1
N
0.835
cassava34238.m1
Manihot esculenta
cassava34238.m1
N
0.876
Ca_21518
Cicer arietinum
Ca_21518
N
0.876
chr1.CM0147.220.nd
Lotus japonicus
chr1.CM0147.220.nd
N
0.887
Ciclev10019039m.g
Citrus clementina
Ciclev10019039m.g
N
0.897
Cla015213
Citrullus lanatus
Cla015213
N
0.816
Cucsa.078480
Cucumis sativus
Cucsa.078480
N
0.887
Eucgr.H00815
Eucalyptus grandis
Eucgr.H00815
N
0.783
evm.TU.supercontig_8.187
Carica papaya
evm.TU.supercontig_8.187
N
0.897
F775_43744
Aegilops tauschii
F775_43744
N
0.918
gene17562-v1.0-hybrid
Fragaria vesca
gene17562-v1.0-hybrid
N
0.832
GLYMA08G47240
Glycine max
GLYMA08G47240
N
0.888
GLYMA18G38490
Glycine max
GLYMA18G38490
N
0.888
Gorai.001G184300
Gossypium raimondii
Gorai.001G184300
N
0.907
GRMZM2G133398
Zea mays
GRMZM2G133398
N
1.000
GSMUA_Achr7G23040_001
Musa acuminata
GSMUA_Achr7G23040_001
N
0.918
GSMUA_AchrUn_randomG18520_001
Musa acuminata
GSMUA_AchrUn_randomG18520_001
N
0.918
LPERR01G35880
Leersia perrieri
LPERR01G35880
N
0.939
Lus10011888.g
Linum usitatissimum
Lus10011888.g
N
0.897
Lus10022820.g
Linum usitatissimum
Lus10022820.g
N
0.918
MDP0000166580
Malus domestica
MDP0000166580
N
0.764
MDP0000309680
Malus domestica
MDP0000309680
N
0.887
mgf023017m
Mimulus guttatus
mgf023017m
N
0.876
MLOC_69727
Hordeum vulgare
MLOC_69727
N
0.918
MTR_7g059330
Medicago truncatula
MTR_7g059330
N
0.876
OB01G50120
Oryza brachyantha
OB01G50120
N
0.979
OBART01G41410
Oryza barthii
OBART01G41410
N
0.959
OGLUM01G45580
Oryza glumaepatula
OGLUM01G45580
N
0.959
OLONG_001180
Oryza longistaminata
OLONG_001180
N
0.896
OMERI01G38380
Oryza meridionalis
OMERI01G38380
N
0.896
ONIVA01G46510
Oryza nivara
ONIVA01G46510
N
0.959
orange1.1g038867m.g
Citrus sinensis
orange1.1g038867m.g
N
0.887
ORGLA01G0353400
Oryza glaberrima
ORGLA01G0353400
N
0.959
ORUFI01G44750
Oryza rufipogon
ORUFI01G44750
N
0.959
Pavir.Ea03476
Panicum virgatum
Pavir.Ea03476
N
1.000
Pavir.J03563
Panicum virgatum
Pavir.J03563
N
1.000
PDK_20s1318001g001
Phoenix dactylifera
PDK_20s1318001g001
N
0.806
PGSC0003DMG400020088
Solanum tuberosum
PGSC0003DMG400020088
N
0.866
PGSC0003DMG400020155
Solanum tuberosum
PGSC0003DMG400020155
N
0.856
Pm020417
Prunus mume
Pm020417
N
0.887
POPTR_0002s25330
Populus trichocarpa
POPTR_0002s25330
N
0.918
PRUPE_ppa001608mg
Prunus persica
PRUPE_ppa001608mg
N
0.887
SapurV1A.0937s0080
Salix purpurea
SapurV1A.0937s0080
N
0.897
Sb03g043480
Sorghum bicolor
Sb03g043480
N
0.990
Solyc06g083590.2
Solanum lycopersicum
Solyc06g083590.2
N
0.825
Solyc06g083600.1
Solanum lycopersicum
Solyc06g083600.1
N
0.856
TCM_003056
Theobroma cacao
TCM_003056
N
0.897
Thhalv10003110m.g
Eutrema salsugineum
Thhalv10003110m.g
N
0.887
TRAES3BF066400010CFD_g
Triticum aestivum
TRAES3BF066400010CFD_g
N
0.918
TRIUR3_22986
Triticum urartu
TRIUR3_22986
N
0.744
VP1
Oryza sativa
OS01G0911700
N
0.898