CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm021537
(
Prunus mume
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pm021537
T022105_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm021537
B3
1
78
MIPENFVKKFRDDLSTVATLSVPDGNVWRVLIKQADNKFWFHDGWQEFIERYSIRVGYFLTFRYEGRSSFTVHIFNLT
Pm021537
B3
280
374
CRVVLRPSYLYRGCIMYLPSCFAEKNLNGVSGFIKLQSSDGRQWPVRCLYRGGRAKLSQGWYEFTLENNLGEGDVCVFELLKMKEVVLKVTVFCV
Links
Other
B3
family TFs
Other
Prunus mume
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
0.983
MDP0000238744
Malus domestica
MDP0000238744
N
0.855
MDP0000555456
Malus domestica
MDP0000555456
N
0.855
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
0.827
29851.m002498
Ricinus communis
29851.m002498
I
0.821
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
0.803
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
0.798
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.786
GLYMA20G01130
Glycine max
GLYMA20G01130
N
0.780
GLYMA11G13210
Glycine max
GLYMA11G13210
N
0.775
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
0.775
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
0.775
Ca_14825
Cicer arietinum
Ca_14825
N
0.769
PK10791.1
Cannabis sativa
PK10791.1
I
0.767
Ca_13671
Cicer arietinum
Ca_13671
N
0.757
Cla010445
Citrullus lanatus
Cla010445
I
0.757
Ciclev10028642m.g
Citrus clementina
Ciclev10028642m.g
I
0.757
orange1.1g016655m.g
Citrus sinensis
orange1.1g016655m.g
I
0.757
POPTR_0004s15400
Populus trichocarpa
POPTR_0004s15400
I
0.751
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
0.751
TCM_006971
Theobroma cacao
TCM_006971
I
0.750
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
0.736
SapurV1A.2089s0010
Salix purpurea
SapurV1A.2089s0010
I
0.734
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
0.723
Cucsa.110000
Cucumis sativus
Cucsa.110000
N
0.717
GLYMA12G05250
Glycine max
GLYMA12G05250
N
0.709
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
0.704