CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29801.m003200
(
Ricinus communis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
29801.m003200
T022168_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29801.m003200
B3
140
231
FVKPMLQSHVTGGFWLGLPVQFCKDHLPSRDEYITLVDENGDASETKYLVQKNGLSGGWRGFAIDHQLVDGDALVFQLVSPKEFKVFIIRAN
Links
Other
B3
family TFs
Other
Ricinus communis
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava1104.valid.m1
Manihot esculenta
cassava1104.valid.m1
N
0.815
PK25650.1
Cannabis sativa
PK25650.1
N
0.804
Thhalv10019015m.g
Eutrema salsugineum
Thhalv10019015m.g
N
0.739
SapurV1A.0090s0770
Salix purpurea
SapurV1A.0090s0770
N
0.793
SapurV1A.0090s0760
Salix purpurea
SapurV1A.0090s0760
N
0.717
orange1.1g036915m.g
Citrus sinensis
orange1.1g036915m.g
N
0.707
Lus10019870.g
Linum usitatissimum
Lus10019870.g
N
0.793
Lus10014044.g
Linum usitatissimum
Lus10014044.g
N
0.761
Gorai.013G042700
Gossypium raimondii
Gorai.013G042700
N
0.761
evm.TU.supercontig_62.23
Carica papaya
evm.TU.supercontig_62.23
N
0.772
mgf008645m
Mimulus guttatus
mgf008645m
N
0.707
Cucsa.219930
Cucumis sativus
Cucsa.219930
N
0.761
AT3G19184
Arabidopsis thaliana
AT3G19184
N
0.717
Cla016258
Citrullus lanatus
Cla016258
N
0.772
VIT_03s0063g00620
Vitis vinifera
VIT_03s0063g00620
N
0.739
TCM_007039
Theobroma cacao
TCM_007039
N
0.783
Solyc01g108140.2
Solanum lycopersicum
Solyc01g108140.2
N
0.793
POPTR_0009s10600
Populus trichocarpa
POPTR_0009s10600
N
0.739
POPTR_0009s10590
Populus trichocarpa
POPTR_0009s10590
N
0.826
PGSC0003DMG400025792
Solanum tuberosum
PGSC0003DMG400025792
N
0.804
fgenesh2_kg.3__2134__AT3G19184.1
Arabidopsis lyrata
fgenesh2_kg.3__2134__AT3G19184.1
N
0.728
Bra035129
Brassica rapa
Bra035129
N
0.739
Bo6g124000
Brassica oleracea
Bo6g124000
N
0.717