29917.m001969 (Ricinus communis)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 29917.m001969 T022186_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29917.m001969 B3 325 426

Links

Other B3 family TFs
Other Ricinus communis TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.960
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.960
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.949
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.949
PK04158.1 Cannabis sativa PK04158.1 N 0.949
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.939
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.929
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.929
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.929
Pm009906 Prunus mume Pm009906 N 0.929
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.929
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.929
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.929
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.929
TCM_029976 Theobroma cacao TCM_029976 N 0.919
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.909
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.909
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.899
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.889
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.889
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.889
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.889
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.889
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.889
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.889
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.879
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.879
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.879
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.879
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.879
Si028829m.g Setaria italica Si028829m.g N 0.879
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.879
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.878
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.869
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.869
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.869
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.869
OBART07G18780 Oryza barthii OBART07G18780 N 0.869
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.869
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.869
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.869
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.869
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.869
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.869
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.869
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.869
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.869
PK13763.1 Cannabis sativa PK13763.1 N 0.869
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.859
Bo7g115560 Brassica oleracea Bo7g115560 N 0.859
Bo7g115570 Brassica oleracea Bo7g115570 N 0.859
Bra023968 Brassica rapa Bra023968 N 0.859
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.859
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.859
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.859
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.859
TCM_019701 Theobroma cacao TCM_019701 N 0.859
Pm003031 Prunus mume Pm003031 N 0.859
29915.m000469 Ricinus communis 29915.m000469 N 0.859
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.859
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.859
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.859
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.859
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.859
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.859
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.859
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.859
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.848
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.848
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.848
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.848
Ca_23185 Cicer arietinum Ca_23185 N 0.848
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.848
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.848
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.848
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.848
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.838
F775_32613 Aegilops tauschii F775_32613 N 0.838
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.838
OB07G31850 Oryza brachyantha OB07G31850 N 0.838
OBART07G26400 Oryza barthii OBART07G26400 N 0.838
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.838
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.838
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.838
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.838
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.838
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.838
OS07G0679700 Oryza sativa OS07G0679700 N 0.838
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.838
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.838
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.838
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.838
Cla018330 Citrullus lanatus Cla018330 N 0.838
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.838
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.838
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.838
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.838
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.828
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.828
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.828
Si028834m.g Setaria italica Si028834m.g N 0.828
Ca_08924 Cicer arietinum Ca_08924 N 0.828
Pm000247 Prunus mume Pm000247 N 0.828
mgf007363m Mimulus guttatus mgf007363m N 0.828
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.828
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.828
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.828
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.828
PK09020.1 Cannabis sativa PK09020.1 N 0.827
OS07G0563350 Oryza sativa OS07G0563350 N 0.822
Bo4g058460 Brassica oleracea Bo4g058460 N 0.818
Bo4g173060 Brassica oleracea Bo4g173060 N 0.818
Bra018313 Brassica rapa Bra018313 N 0.818
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.818
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.818
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.818
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.818
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.818
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.818
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.818
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.818
TCM_042290 Theobroma cacao TCM_042290 N 0.818
mgf024907m Mimulus guttatus mgf024907m N 0.818
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.818
Bra021635 Brassica rapa Bra021635 N 0.808
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.808
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.808
29976.m000497 Ricinus communis 29976.m000497 N 0.808
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.808
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.808
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.808
MDP0000127640 Malus domestica MDP0000127640 N 0.808
MDP0000229344 Malus domestica MDP0000229344 N 0.808
MDP0000267885 Malus domestica MDP0000267885 N 0.808
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.808
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.806
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.806
VAL1 Arabidopsis thaliana AT2G30470 N 0.798
Bo3g024640 Brassica oleracea Bo3g024640 N 0.798
Bra022801 Brassica rapa Bra022801 N 0.798
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.798
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.798
Cla008225 Citrullus lanatus Cla008225 N 0.798
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.798
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.798
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.798
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.788
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.788
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.788
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.788
mgf007846m Mimulus guttatus mgf007846m N 0.788
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.788
VAL2 Arabidopsis thaliana AT4G32010 N 0.784
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.784
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.784
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.784
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.783
Ca_00244 Cicer arietinum Ca_00244 N 0.781
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.779
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.778
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.778
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.768
F775_30051 Aegilops tauschii F775_30051 N 0.760
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.758
mgf013365m Mimulus guttatus mgf013365m N 0.758
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.758
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.750
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.747
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.747
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.747
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.737
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.737
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.737
MDP0000274788 Malus domestica MDP0000274788 N 0.737
Bo1g024250 Brassica oleracea Bo1g024250 N 0.727
Bra013535 Brassica rapa Bra013535 N 0.727
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.717
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.717
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.717
Ca_15659 Cicer arietinum Ca_15659 N 0.707