Cagra.3519s0007 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.3519s0007 T022789_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.3519s0007.1.p B3 323 424

Links

Other B3 family TFs
Other Capsella grandiflora TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.980
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.909
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.808
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.768
Bra021635 Brassica rapa Bra021635 N 0.768
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.768
PK13763.1 Cannabis sativa PK13763.1 N 0.768
Bo1g024250 Brassica oleracea Bo1g024250 N 0.758
Bo3g024640 Brassica oleracea Bo3g024640 N 0.758
Bra013535 Brassica rapa Bra013535 N 0.758
Bra022801 Brassica rapa Bra022801 N 0.758
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.758
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.758
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.758
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.758
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.758
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.758
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.758
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.758
Si028829m.g Setaria italica Si028829m.g N 0.758
TCM_019701 Theobroma cacao TCM_019701 N 0.758
Ca_23185 Cicer arietinum Ca_23185 N 0.758
Cla018330 Citrullus lanatus Cla018330 N 0.758
Pm003031 Prunus mume Pm003031 N 0.758
Pm009906 Prunus mume Pm009906 N 0.758
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.758
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.758
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.758
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.758
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.758
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.758
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.758
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.758
PK04158.1 Cannabis sativa PK04158.1 N 0.758
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.750
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.747
Bo4g173060 Brassica oleracea Bo4g173060 N 0.747
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.747
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.747
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.747
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.747
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.747
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.747
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.747
OBART07G18780 Oryza barthii OBART07G18780 N 0.747
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.747
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.747
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.747
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.747
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.747
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.747
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.747
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.747
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.747
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.747
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.747
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.747
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.747
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.747
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.747
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.747
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.747
29915.m000469 Ricinus communis 29915.m000469 N 0.747
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.747
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.747
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.747
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.747
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.747
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.747
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.747
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.747
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.747
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.747
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.745
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.745
VAL3 Arabidopsis thaliana AT4G21550 N 0.742
VAL1 Arabidopsis thaliana AT2G30470 N 0.737
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.737
Bo4g058460 Brassica oleracea Bo4g058460 N 0.737
Bo7g115560 Brassica oleracea Bo7g115560 N 0.737
Bo7g115570 Brassica oleracea Bo7g115570 N 0.737
Bra018313 Brassica rapa Bra018313 N 0.737
Bra023968 Brassica rapa Bra023968 N 0.737
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.737
F775_32613 Aegilops tauschii F775_32613 N 0.737
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.737
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.737
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.737
OB07G31850 Oryza brachyantha OB07G31850 N 0.737
OBART07G26400 Oryza barthii OBART07G26400 N 0.737
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.737
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.737
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.737
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.737
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.737
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.737
OS07G0679700 Oryza sativa OS07G0679700 N 0.737
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.737
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.737
Si028834m.g Setaria italica Si028834m.g N 0.737
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.737
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.737
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.737
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.737
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.737
29917.m001969 Ricinus communis 29917.m001969 N 0.737
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.737
mgf007363m Mimulus guttatus mgf007363m N 0.737
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.737
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.737
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.737
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.737
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.737
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.737
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.737
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.737
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.737
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.737
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.737
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.737
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.735
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.727
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.727
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.727
TCM_029976 Theobroma cacao TCM_029976 N 0.727
TCM_042290 Theobroma cacao TCM_042290 N 0.727
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.727
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.727
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.727
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.727
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.727
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.727
OS07G0563350 Oryza sativa OS07G0563350 N 0.726
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.724
PK09020.1 Cannabis sativa PK09020.1 N 0.724
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.717
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.717
Ca_08924 Cicer arietinum Ca_08924 N 0.717
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.717
Ca_15659 Cicer arietinum Ca_15659 N 0.714
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.709
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.707
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.707
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.707
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.707
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.707
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.707
Pm000247 Prunus mume Pm000247 N 0.707
mgf007846m Mimulus guttatus mgf007846m N 0.707
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.707
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.707
MDP0000127640 Malus domestica MDP0000127640 N 0.707
MDP0000229344 Malus domestica MDP0000229344 N 0.707
MDP0000267885 Malus domestica MDP0000267885 N 0.707
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.700