CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10016313m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10016313m.g
T022878_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10016313m
B3
200
317
FEKTLFVTDVNPTQNRLSMPFNNLLRNDFLTPVESRIIDEDINNNKKIGVGAILVDQWSKKWGVMLKRWEMKKDSGRGSWNYNLICGWNDIVEANGLKDGDKITLWSFRCCGILCFAM
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_05578
Aegilops tauschii
F775_05578
N
F775_06631
Aegilops tauschii
F775_06631
N
F775_12811
Aegilops tauschii
F775_12811
N
F775_20352
Aegilops tauschii
F775_20352
N
Traes_1BS_566CEE7F6
Triticum aestivum
Traes_1BS_566CEE7F6
N
Traes_5DS_9F4A5AE9F
Triticum aestivum
Traes_5DS_9F4A5AE9F
N
Traes_6AS_B211B0425
Triticum aestivum
Traes_6AS_B211B0425
N
Traes_6BS_A303CDF0B
Triticum aestivum
Traes_6BS_A303CDF0B
N
Traes_6DS_0E84AAF77
Triticum aestivum
Traes_6DS_0E84AAF77
N
Traes_6DS_2ED8299A11
Triticum aestivum
Traes_6DS_2ED8299A11
N
Traes_6DS_64DD7BAA2
Triticum aestivum
Traes_6DS_64DD7BAA2
N
Traes_6DS_9E1F83202
Triticum aestivum
Traes_6DS_9E1F83202
N
Traes_6DS_EF75D5C67
Triticum aestivum
Traes_6DS_EF75D5C67
N
Traes_6DS_F6C7E588F
Triticum aestivum
Traes_6DS_F6C7E588F
N
TRIUR3_00257
Triticum urartu
TRIUR3_00257
N
TRIUR3_13043
Triticum urartu
TRIUR3_13043
N
TRIUR3_31814
Triticum urartu
TRIUR3_31814
N