CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gene29771-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene29771-v1.0-hybrid
T023272_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARF3
M00852_2.00
Arabidopsis thaliana
NKGTYBNN
NNVRACMN
PBM
Franco-Zorrilla et al.(2014)
ETTIN
0.939
0.939
ARF2
M06714_2.00
Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN
Dap-seq
OMalley et al.(2016)
ARF2_col_v31
0.765
0.765
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29771.1-v1.0-hybrid
B3
144
246
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAA
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
477 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
16628_YMR176W
Saccharomyces paradoxus
16628_YMR176W
I
17061_Multiple
Saccharomyces mikatae
17061_Multiple
I
18935_YMR176W
Saccharomyces bayanus
18935_YMR176W
I
A1O1_02396
Capronia coronata
A1O1_02396
I
A1O3_00648
Capronia epimyces
A1O3_00648
I
A1O5_01000
Cladophialophora psammophila
A1O5_01000
I
A1O7_04628
Cladophialophora yegresii
A1O7_04628
I
A1O9_09248
Exophiala aquamarina
A1O9_09248
I
AACERI_AaceriAFL127C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL127C
I
AB01205.1
Alternaria brassicicola
AB01205.1
I
ACLA_001740
Aspergillus clavatus
CADACLAG00000030
I
ACRE_026770
Acremonium chrysogenum
ACRE_026770
I
AFUA_5G03430
Aspergillus fumigatus
CADAFUAG00002555
I
AGOS_AFL127C
Ashbya gossypii
AGOS_AFL127C
I
ANIA_08211
Aspergillus nidulans
CADANIAG00004258
I
AOL_s00007g450
Arthrobotrys oligospora
AOL_s00007g450
I
ARB_06850
Arthroderma benhamiae
ARB_06850
I
ATEG_08071
Aspergillus terreus
CADATEAG00004027
I
AUEXF2481DRAFT_73501
Aureobasidium subglaciale
AUEXF2481DRAFT_73501
I
BAUCODRAFT_567336
Baudoinia compniacensis
BAUCODRAFT_567336
I
BBA_06597
Beauveria bassiana
BBA_06597
I
Bcin02g00190
Botrytis cinerea
Bcin02g00190
I
BDDG_05039
Blastomyces dermatitidis
BDDG_05039
I
BGHDH14_bgh06435
Blumeria graminis
BGHDH14_bgh06435
I
BN7_4555
Wickerhamomyces ciferrii
BN7_4555
I
CADAFLAG00010689
Aspergillus flavus
CADAFLAG00010689
I
CADANGAG00008115
Aspergillus niger
CADANGAG00008115
I
CADAORAG00009843
Aspergillus oryzae
CADAORAG00009843
I
CC1G_01421
Coprinopsis cinerea
CC1G_01421
I
CCM_07966
Cordyceps militaris
CCM_07966
I
CERSUDRAFT_111018
Ceriporiopsis subvermispora
CERSUDRAFT_111018
I
CFIO01_06489
Colletotrichum fioriniae
CFIO01_06489
I
CGGC5_4303
Colletotrichum gloeosporioides
CGGC5_4303
I
CH063_04817
Colletotrichum higginsianum
CH063_04817
I
CHGG_07655
Chaetomium globosum
CHGG_07655
I
CIMG_06555
Coccidioides immitis
CIMG_06555
I
CMQ_2334
Grosmannia clavigera
CMQ_2334
I
Cob_08727
Colletotrichum orbiculare
Cob_08727
I
COCC4DRAFT_162164
Bipolaris maydis
COCC4DRAFT_162164
I
COCCADRAFT_5842
Bipolaris zeicola
COCCADRAFT_5842
I
COCMIDRAFT_5916
Bipolaris oryzae
COCMIDRAFT_5916
I
COCSADRAFT_82804
Bipolaris sorokiniana
COCSADRAFT_82804
I
COCVIDRAFT_24723
Bipolaris victoriae
COCVIDRAFT_24723
I
CPC735_030240
Coccidioides posadasii
CPC735_030240
I
CPUR_02782
Claviceps purpurea
CPUR_02782
I
CSUB01_10732
Colletotrichum sublineola
CSUB01_10732
I
CTHT_0027590
Chaetomium thermophilum
CTHT_0027590
I
DOTSEDRAFT_72726
Dothistroma septosporum
DOTSEDRAFT_72726
I
ECM5
Saccharomyces cerevisiae
YMR176W
I
ENSCING00000020769
Ciona intestinalis
ENSCING00000020769
N
ENSCSAVG00000000499
Ciona savignyi
ENSCSAVG00000000499
N
EPUS_07035
Endocarpon pusillum
EPUS_07035
I
estExt_fgenesh1_pg.C_11736
Cryphonectria parasitica
estExt_fgenesh1_pg.C_11736
I
estExt_fgenesh2_pg.C_10495
Neurospora discreta
estExt_fgenesh2_pg.C_10495
I
estExt_Genewise1Plus.C_70765
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70765
I
estExt_Genewise1Plus.C_chr_80065
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_80065
I
EURHEDRAFT_374583
Aspergillus ruber
EURHEDRAFT_374583
I
EV44_g6012
Erysiphe necator
EV44_g6012
I
F503_04087
Ophiostoma piceae uamh
F503_04087
I
FFUJ_13017
Fusarium fujikuroi
FFUJ_13017
I
fgenesh1_pg.00153_#_202
Aspergillus carbonarius
fgenesh1_pg.00153_#_202
I
fgenesh1_pg.C_scaffold_2000567
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_2000567
I
FGRRES_16557
Fusarium graminearum
FGRRES_16557
I
FPSE_05803
Fusarium pseudograminearum
FPSE_05803
I
G647_04054
Cladophialophora carrionii
G647_04054
I
GGTG_06066
Gaeumannomyces graminis
GGTG_06066
I
GLRG_10729
Colletotrichum graminicola
GLRG_10729
I
GMDG_07609
Pseudogymnoascus destructans
GMDG_07609
I
GSTUM_00011726001
Tuber melanosporum
GSTUM_00011726001
I
gww2.2.61.1
Phanerochaete chrysosporium
gww2.2.61.1
I
H072_8579
Dactylellina haptotyla
H072_8579
I
H101_00678
Trichophyton interdigitale
H101_00678
I
HCBG_06506
Histoplasma capsulatum
HCBG_06506
I
HMPREF1120_02353
Exophiala dermatitidis
HMPREF1120_02353
I
HMPREF1541_08981
Cyphellophora europaea
HMPREF1541_08981
I
HMPREF1624_03854
Sporothrix schenckii
HMPREF1624_03854
I
KAFR_0A07050
Kazachstania africana
KAFR_0A07050
I
KLLA0_C16203g
Kluyveromyces lactis
KLLA0_C16203g
I
KLTH0H03410g
Lachancea thermotolerans
KLTH0H03410g
I
KLTH0H03410g
Kluyveromyces thermotolerans
KLTH0H03410g
I
KNAG_0F01780
Kazachstania naganishii
KNAG_0F01780
I
KUCA_T00003760001
Kuraishia capsulata
KUCA_T00003760001
I
Kwal_24206
Kluyveromyces waltii
Kwal_24206
I
LALA0_S05e06744g
Lachancea lanzarotensis
LALA0_S05e06744g
I
LEMA_P003470.1
Leptosphaeria maculans
LEMA_P003470.1
I
M437DRAFT_88829
Aureobasidium melanogenum
M437DRAFT_88829
I
M438DRAFT_363827
Aureobasidium pullulans
M438DRAFT_363827
I
MAC_04053
Metarhizium acridum
MAC_04053
I
MAJ_08493
Metarhizium majus
MAJ_08493
I
MAM_07193
Metarhizium album
MAM_07193
I
MANI_025504
Metarhizium anisopliae
MANI_025504
I
MAPG_04048
Magnaporthe poae
MAPG_04048
I
MBM_08533
Marssonina brunnea
MBM_08533
I
MBR_07220
Metarhizium brunneum
MBR_07220
I
MCYG_01846
Microsporum canis
MCYG_01846
I
MCYG_01846
Arthroderma otae
MCYG_01846
I
MGG_04878
Magnaporthe oryzae
MGG_04878
I
MGU_06069
Metarhizium guizhouense
MGU_06069
I
MGYG_04221
Microsporum gypseum
MGYG_04221
I
MPH_03949
Macrophomina phaseolina
MPH_03949
I
MYCFIDRAFT_104171
Pseudocercospora fijiensis
MYCFIDRAFT_104171
I
MYCTH_2301553
Myceliophthora thermophila
MYCTH_2301553
I
NCAS_0D03980
Naumovozyma castellii
NCAS_0D03980
I
NCU01238
Neurospora crassa
NCU01238
D
NDAI_0I00930
Naumovozyma dairenensis
NDAI_0I00930
I
NEUTE1DRAFT_127630
Neurospora tetrasperma
NEUTE1DRAFT_127630
I
NFIA_038680
Neosartorya fischeri
CADNFIAG00003100
I
OIDMADRAFT_165409
Oidiodendron maius
OIDMADRAFT_165409
I
PAAG_04304
Paracoccidioides sp lutzii
PAAG_04304
I
PABG_04080
Paracoccidioides brasiliensis
PABG_04080
I
PAS_chr2-1_0025
Komagataella pastoris
PAS_chr2-1_0025
I
PAXRUDRAFT_826282
Paxillus rubicundulus
PAXRUDRAFT_826282
I
Pc21g15950
Penicillium chrysogenum
Pc21g15950
I
PCH_Pc21g15950
Penicillium rubens
PCH_Pc21g15950
I
PDE_09498
Penicillium oxalicum
PDE_09498
I
PDIP_48900
Penicillium digitatum
PDIP_48900
I
PEX1_017870
Penicillium expansum
PEX1_017870
I
PFICI_11606
Pestalotiopsis fici
PFICI_11606
I
PILCRDRAFT_827743
Piloderma croceum
PILCRDRAFT_827743
I
PITC_013420
Penicillium italicum
PITC_013420
I
PMAA_082150
Talaromyces marneffei
PMAA_082150
I
PMAA_082150
Penicillium marneffei
PMAA_082150
I
PODANS_2_6940
Podospora anserina
PODANS_2_6940
I
PTRG_11043
Pyrenophora triticirepentis
PTRG_11043
I
PTT_07707
Pyrenophora teres
PTT_07707
I
PV04_04630
Capronia semiimmersa
PV04_04630
I
PV05_02348
Exophiala xenobiotica
PV05_02348
I
PV06_01624
Exophiala oligosperma
PV06_01624
I
PV07_05545
Cladophialophora immunda
PV07_05545
I
PV08_02493
Exophiala spinifera
PV08_02493
I
PV09_01976
Verruconis gallopava
PV09_01976
I
PV10_06581
Exophiala mesophila
PV10_06581
I
PV11_02063
Exophiala sideris
PV11_02063
I
PVAR5_5506
Byssochlamys spectabilis
PVAR5_5506
I
S40285_02726
Stachybotrys chlorohalonata
S40285_02726
I
S40288_09644
Stachybotrys chartarum
S40288_09644
I
SAKL0A03674g
Lachancea kluyveri
SAKL0A03674g
I
SAPIO_CDS8283
Scedosporium apiospermum
SAPIO_CDS8283
I
SBOR_1449
Sclerotinia borealis
SBOR_1449
I
Scas_Contig720.39
Saccharomyces castellii
Scas_Contig720.39
I
SEPMUDRAFT_46716
Sphaerulina musiva
SEPMUDRAFT_46716
I
SETTUDRAFT_92929
Setosphaeria turcica
SETTUDRAFT_92929
I
SKUD_186004
Saccharomyces kudriavzevii
SKUD_186004
I
SMAC_03938
Sordaria macrospora
SMAC_03938
I
SNOG_11200
Stagonospora nodorum
SNOG_11200
I
SNOG_11200
Phaeosphaeria nodorum
SNOG_11200
I
SPBR_01187
Sporothrix brasiliensis
SPBR_01187
I
SS1G_01477
Sclerotinia sclerotiorum
SS1G_01477
I
SU7_0694
Saccharomyces arboricola
SU7_0694
I
TEQG_03551
Trichophyton equinum
TEQG_03551
I
TESG_00566
Trichophyton tonsurans
TESG_00566
I
THITE_2107776
Thielavia terrestris
THITE_2107776
I
TPHA_0E02720
Tetrapisispora phaffii
TPHA_0E02720
I
TRIATDRAFT_229470
Trichoderma atroviride
TRIATDRAFT_229470
I
TRV_05239
Trichophyton verrucosum
TRV_05239
I
TSTA_116820
Talaromyces stipitatus
TSTA_116820
I
U727_00430460301
Penicillium solitum
U727_00430460301
I
UCRNP2_8300
Neofusicoccum parvum
UCRNP2_8300
I
UCRPA7_3563
Togninia minima
UCRPA7_3563
I
UREG_03885
Uncinocarpus reesii
UREG_03885
I
UV8b_135
Ustilaginoidea virens
UV8b_135
I
VDAG_09307
Verticillium dahliae
VDAG_09307
I
VDBG_07586
Verticillium albo atrum
VDBG_07586
I
VDBG_07586
Verticillium alfalfae
VDBG_07586
I
VHEMI05600
Torrubiella hemipterigena
VHEMI05600
I
W97_02158
Coniosporium apollinis
W97_02158
I
X797_006583
Metarhizium robertsii
X797_006583
I
XP_002490905.1
Pichia pastoris
XP_002490905.1
I
YALI0_C16390g
Yarrowia lipolytica
YALI0_C16390g
I
Z517_06623
Fonsecaea pedrosoi
Z517_06623
I
Z518_00744
Rhinocladiella mackenziei
Z518_00744
I
Z519_00926
Cladophialophora bantiana
Z519_00926
I
ZBAI_04622
Zygosaccharomyces bailii
ZBAI_04622
I
ZBAI_06663
Zygosaccharomyces bailii
ZBAI_06663
I
ZYRO0E07546g
Zygosaccharomyces rouxii
ZYRO0E07546g
I