CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene30690-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene30690-v1.0-hybrid
T023274_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna30690.1-v1.0-hybrid
B3
623
723
FEKMLSASDAGKIGRLVLPKKCAEAYFPPISHPEGLPLTVHDSLGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDIVTFSRLEPGGKLVMGCRKA
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00003p00266720
Amborella trichopoda
AMTR_s00003p00266720
N
0.867
VAL1
Arabidopsis thaliana
AT2G30470
N
0.796
VAL2
Arabidopsis thaliana
AT4G32010
N
0.784
BGIOSGA023709
Oryza indica
BGIOSGA023709
N
0.857
BGIOSGA025947
Oryza indica
BGIOSGA025947
N
0.859
Bo1g024250
Brassica oleracea
Bo1g024250
N
0.765
Bo3g024640
Brassica oleracea
Bo3g024640
N
0.816
Bo4g058460
Brassica oleracea
Bo4g058460
N
0.818
Bo4g173060
Brassica oleracea
Bo4g173060
N
0.816
Bo7g115560
Brassica oleracea
Bo7g115560
N
0.867
Bo7g115570
Brassica oleracea
Bo7g115570
N
0.867
Bra013535
Brassica rapa
Bra013535
N
0.758
Bra018313
Brassica rapa
Bra018313
N
0.818
Bra021635
Brassica rapa
Bra021635
N
0.816
Bra022801
Brassica rapa
Bra022801
N
0.816
Bra023968
Brassica rapa
Bra023968
N
0.867
BRADI1G17680
Brachypodium distachyon
BRADI1G17680
N
0.867
BRADI1G24720
Brachypodium distachyon
BRADI1G24720
N
0.859
F775_30051
Aegilops tauschii
F775_30051
N
0.750
F775_32613
Aegilops tauschii
F775_32613
N
0.857
GLYMA01G32810
Glycine max
GLYMA01G32810
N
0.847
GLYMA02G40280
Glycine max
GLYMA02G40280
N
0.765
GLYMA03G04330
Glycine max
GLYMA03G04330
N
0.847
GLYMA11G31234
Glycine max
GLYMA11G31234
N
0.806
GLYMA13G31970
Glycine max
GLYMA13G31970
N
0.838
GLYMA14G38492
Glycine max
GLYMA14G38492
N
0.796
GLYMA15G07350
Glycine max
GLYMA15G07350
N
0.838
GLYMA18G05840
Glycine max
GLYMA18G05840
N
0.806
GRMZM2G008356
Zea mays
GRMZM2G008356
N
0.857
GRMZM2G158162
Zea mays
GRMZM2G158162
N
0.838
GRMZM2G172621
Zea mays
GRMZM2G172621
N
0.838
GSMUA_Achr4G23790_001
Musa acuminata
GSMUA_Achr4G23790_001
N
0.837
GSMUA_Achr5G27930_001
Musa acuminata
GSMUA_Achr5G27930_001
N
0.818
GSMUA_Achr7G00120_001
Musa acuminata
GSMUA_Achr7G00120_001
N
0.838
GSMUA_Achr8G01750_001
Musa acuminata
GSMUA_Achr8G01750_001
N
0.808
GSMUA_Achr8G03800_001
Musa acuminata
GSMUA_Achr8G03800_001
N
0.848
LPERR07G16110
Leersia perrieri
LPERR07G16110
N
0.859
LPERR07G23240
Leersia perrieri
LPERR07G23240
N
0.857
MLOC_36861
Hordeum vulgare
MLOC_36861
N
0.779
MLOC_4657
Hordeum vulgare
MLOC_4657
N
0.848
MTR_2g011940
Medicago truncatula
MTR_2g011940
N
0.838
MTR_3g467380
Medicago truncatula
MTR_3g467380
N
0.796
MTR_4g028130
Medicago truncatula
MTR_4g028130
N
0.847
OB07G31850
Oryza brachyantha
OB07G31850
N
0.857
OBART07G18780
Oryza barthii
OBART07G18780
N
0.859
OBART07G26400
Oryza barthii
OBART07G26400
N
0.857
OGLUM07G18530
Oryza glumaepatula
OGLUM07G18530
N
0.859
OGLUM07G26430
Oryza glumaepatula
OGLUM07G26430
N
0.857
OLONG_008212
Oryza longistaminata
OLONG_008212
N
0.857
OLONG_013183
Oryza longistaminata
OLONG_013183
N
0.859
OMERI07G15550
Oryza meridionalis
OMERI07G15550
N
0.859
OMERI07G23020
Oryza meridionalis
OMERI07G23020
N
0.857
ONIVA07G17160
Oryza nivara
ONIVA07G17160
N
0.859
ONIVA07G26110
Oryza nivara
ONIVA07G26110
N
0.857
OPUNC07G17640
Oryza punctata
OPUNC07G17640
N
0.859
OPUNC07G24850
Oryza punctata
OPUNC07G24850
N
0.755
ORGLA07G0151800
Oryza glaberrima
ORGLA07G0151800
N
0.859
ORGLA07G0207500
Oryza glaberrima
ORGLA07G0207500
N
0.857
ORUFI07G19520
Oryza rufipogon
ORUFI07G19520
N
0.859
ORUFI07G27410
Oryza rufipogon
ORUFI07G27410
N
0.857
OS07G0563350
Oryza sativa
OS07G0563350
N
0.822
OS07G0679700
Oryza sativa
OS07G0679700
N
0.857
POPTR_0004s03530
Populus trichocarpa
POPTR_0004s03530
N
0.899
POPTR_0006s10880
Populus trichocarpa
POPTR_0006s10880
N
0.838
POPTR_0011s04340
Populus trichocarpa
POPTR_0011s04340
N
0.899
POPTR_0013s15330
Populus trichocarpa
POPTR_0013s15330
N
0.776
POPTR_0016s14350
Populus trichocarpa
POPTR_0016s14350
N
0.838
POPTR_0019s15070
Populus trichocarpa
POPTR_0019s15070
N
0.788
PRUPE_ppa001220mg
Prunus persica
PRUPE_ppa001220mg
N
0.919
PRUPE_ppa001229mg
Prunus persica
PRUPE_ppa001229mg
N
0.816
PRUPE_ppa001234mg
Prunus persica
PRUPE_ppa001234mg
N
0.857
Sb02g036430
Sorghum bicolor
Sb02g036430
N
0.857
Sb02g043000
Sorghum bicolor
Sb02g043000
N
0.838
HSI2
Arabidopsis lyrata
scaffold_401535.1
N
0.798
HSL1
Arabidopsis lyrata
scaffold_700997.1
N
0.784
SELMODRAFT_451626
Selaginella moellendorffii
SELMODRAFT_451626
N
0.798
SELMODRAFT_451631
Selaginella moellendorffii
SELMODRAFT_451631
N
0.806
SELMODRAFT_451634
Selaginella moellendorffii
SELMODRAFT_451634
N
0.717
SELMODRAFT_451635
Selaginella moellendorffii
SELMODRAFT_451635
N
0.717
Si028829m.g
Setaria italica
Si028829m.g
N
0.857
Si028834m.g
Setaria italica
Si028834m.g
N
0.848
Solyc02g079020.2
Solanum lycopersicum
Solyc02g079020.2
N
0.879
Solyc06g082520.2
Solanum lycopersicum
Solyc06g082520.2
N
0.798
Solyc10g075030.1
Solanum lycopersicum
Solyc10g075030.1
N
0.838
TCM_019701
Theobroma cacao
TCM_019701
N
0.838
TCM_029976
Theobroma cacao
TCM_029976
N
0.918
TCM_042290
Theobroma cacao
TCM_042290
N
0.837
Traes_2AS_C4FD8E351
Triticum aestivum
Traes_2AS_C4FD8E351
N
0.848
Traes_2AS_F4CEC9849
Triticum aestivum
Traes_2AS_F4CEC9849
N
0.857
Traes_2BS_5B00A8C50
Triticum aestivum
Traes_2BS_5B00A8C50
N
0.857
Traes_2BS_A61094919
Triticum aestivum
Traes_2BS_A61094919
N
0.848
Traes_2DS_3E4E3BEFC
Triticum aestivum
Traes_2DS_3E4E3BEFC
N
0.848
Traes_2DS_B1C947D2B
Triticum aestivum
Traes_2DS_B1C947D2B
N
0.857
TRIUR3_04238
Triticum urartu
TRIUR3_04238
N
0.857
VAL3
Vitis vinifera
VIT_00s0181g00260
N
0.869
VIT_06s0004g08100
Vitis vinifera
VIT_06s0004g08100
N
0.808
HSL1
Vitis vinifera
VIT_08s0058g01300
N
0.859
Ca_00244
Cicer arietinum
Ca_00244
N
0.760
Ca_08924
Cicer arietinum
Ca_08924
N
0.827
Ca_15659
Cicer arietinum
Ca_15659
N
0.714
Ca_23185
Cicer arietinum
Ca_23185
N
0.847
Cla008225
Citrullus lanatus
Cla008225
N
0.798
Cla018330
Citrullus lanatus
Cla018330
N
0.837
Pm000247
Prunus mume
Pm000247
N
0.808
Pm003031
Prunus mume
Pm003031
N
0.857
Pm009906
Prunus mume
Pm009906
N
0.919
29915.m000469
Ricinus communis
29915.m000469
N
0.857
29917.m001969
Ricinus communis
29917.m001969
N
0.878
29976.m000497
Ricinus communis
29976.m000497
N
0.778
cassava13133.valid.m1
Manihot esculenta
cassava13133.valid.m1
N
0.806
cassava25238.valid.m1
Manihot esculenta
cassava25238.valid.m1
N
0.847
cassava39646.m1
Manihot esculenta
cassava39646.m1
N
0.918
cassava41301.m1
Manihot esculenta
cassava41301.m1
N
0.918
Cucsa.045980
Cucumis sativus
Cucsa.045980
N
0.888
Cucsa.111990
Cucumis sativus
Cucsa.111990
N
0.739
Cucsa.177010
Cucumis sativus
Cucsa.177010
N
0.837
mgf007363m
Mimulus guttatus
mgf007363m
N
0.837
mgf007846m
Mimulus guttatus
mgf007846m
N
0.765
mgf013365m
Mimulus guttatus
mgf013365m
N
0.776
mgf024907m
Mimulus guttatus
mgf024907m
N
0.827
Aquca_008_00005
Aquilegia coerulea
Aquca_008_00005
N
0.816
Aquca_045_00208
Aquilegia coerulea
Aquca_045_00208
N
0.755
Aquca_063_00016
Aquilegia coerulea
Aquca_063_00016
N
0.837
Bostr.10689s0100
Boechera stricta
Bostr.10689s0100
N
0.768
Bostr.24513s0191
Boechera stricta
Bostr.24513s0191
N
0.806
Bostr.7867s1055
Boechera stricta
Bostr.7867s1055
N
0.867
Cagra.0567s0011
Capsella grandiflora
Cagra.0567s0011
N
0.798
Cagra.12385s0007
Capsella grandiflora
Cagra.12385s0007
N
0.784
Cagra.3519s0007
Capsella grandiflora
Cagra.3519s0007
N
0.724
Carubv10004192m.g
Capsella rubella
Carubv10004192m.g
N
0.717
Carubv10004194m.g
Capsella rubella
Carubv10004194m.g
N
0.784
Carubv10022654m.g
Capsella rubella
Carubv10022654m.g
N
0.806
Ciclev10000225m.g
Citrus clementina
Ciclev10000225m.g
N
0.828
Ciclev10011039m.g
Citrus clementina
Ciclev10011039m.g
N
0.857
Ciclev10014219m.g
Citrus clementina
Ciclev10014219m.g
N
0.899
Eucgr.B04027
Eucalyptus grandis
Eucgr.B04027
N
0.755
Eucgr.E03465
Eucalyptus grandis
Eucgr.E03465
N
0.867
Eucgr.E03467
Eucalyptus grandis
Eucgr.E03467
N
0.745
Eucgr.F02704
Eucalyptus grandis
Eucgr.F02704
N
0.828
Eucgr.L01473
Eucalyptus grandis
Eucgr.L01473
N
0.898
evm.TU.supercontig_0.91
Carica papaya
evm.TU.supercontig_0.91
N
0.848
evm.TU.supercontig_2.296
Carica papaya
evm.TU.supercontig_2.296
N
0.796
gene13877-v1.0-hybrid
Fragaria vesca
gene13877-v1.0-hybrid
N
0.857
gene28098-v1.0-hybrid
Fragaria vesca
gene28098-v1.0-hybrid
N
0.818
Gorai.003G152700
Gossypium raimondii
Gorai.003G152700
N
0.837
Gorai.005G004300
Gossypium raimondii
Gorai.005G004300
N
0.847
Gorai.009G173100
Gossypium raimondii
Gorai.009G173100
N
0.888
Gorai.011G022400
Gossypium raimondii
Gorai.011G022400
N
0.899
Gorai.011G127500
Gossypium raimondii
Gorai.011G127500
N
0.847
Lus10018440.g
Linum usitatissimum
Lus10018440.g
N
0.888
Lus10022741.g
Linum usitatissimum
Lus10022741.g
N
0.816
Lus10025142.g
Linum usitatissimum
Lus10025142.g
N
0.827
Lus10025226.g
Linum usitatissimum
Lus10025226.g
N
0.838
MDP0000127640
Malus domestica
MDP0000127640
N
0.798
MDP0000229344
Malus domestica
MDP0000229344
N
0.796
MDP0000267885
Malus domestica
MDP0000267885
N
0.798
MDP0000274788
Malus domestica
MDP0000274788
N
0.735
orange1.1g002489m.g
Citrus sinensis
orange1.1g002489m.g
N
0.899
orange1.1g002708m.g
Citrus sinensis
orange1.1g002708m.g
N
0.857
Pavir.Ba00225
Panicum virgatum
Pavir.Ba00225
N
0.848
Pavir.Ba00654
Panicum virgatum
Pavir.Ba00654
N
0.867
Pavir.Bb03074
Panicum virgatum
Pavir.Bb03074
N
0.848
Pavir.Bb03754
Panicum virgatum
Pavir.Bb03754
N
0.848
SapurV1A.0028s0060
Salix purpurea
SapurV1A.0028s0060
N
0.898
SapurV1A.0044s0150
Salix purpurea
SapurV1A.0044s0150
N
0.889
SapurV1A.0065s0470
Salix purpurea
SapurV1A.0065s0470
N
0.838
SapurV1A.0215s0260
Salix purpurea
SapurV1A.0215s0260
N
0.786
SapurV1A.0914s0080
Salix purpurea
SapurV1A.0914s0080
N
0.838
SapurV1A.1353s0040
Salix purpurea
SapurV1A.1353s0040
N
0.758
Thhalv10016263m.g
Eutrema salsugineum
Thhalv10016263m.g
N
0.798
Thhalv10024481m.g
Eutrema salsugineum
Thhalv10024481m.g
N
0.867
Thhalv10024526m.g
Eutrema salsugineum
Thhalv10024526m.g
N
0.745
PK04158.1
Cannabis sativa
PK04158.1
N
0.908
PK09020.1
Cannabis sativa
PK09020.1
N
0.827
PK13763.1
Cannabis sativa
PK13763.1
N
0.857
LjSGA_009543.1
Lotus japonicus
LjSGA_009543.1
N
0.727
LjSGA_029833.1
Lotus japonicus
LjSGA_029833.1
N
0.724
PDK_20s13009463g004
Phoenix dactylifera
PDK_20s13009463g004
N
0.857
PDK_20s13009466g004
Phoenix dactylifera
PDK_20s13009466g004
N
0.827
PDK_20s1314471g001
Phoenix dactylifera
PDK_20s1314471g001
N
0.783