CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10025226.g
(
Linum usitatissimum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Lus10025226.g
T023521_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10025226
B3
332
433
FEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGIPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLVMGFRKAS
Links
Other
B3
family TFs
Other
Linum usitatissimum
TFs
183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29915.m000469
Ricinus communis
29915.m000469
N
0.990
29917.m001969
Ricinus communis
29917.m001969
N
0.848
29976.m000497
Ricinus communis
29976.m000497
N
0.879
AMTR_s00003p00266720
Amborella trichopoda
AMTR_s00003p00266720
N
0.929
Aquca_008_00005
Aquilegia coerulea
Aquca_008_00005
N
0.838
Aquca_045_00208
Aquilegia coerulea
Aquca_045_00208
N
0.828
Aquca_063_00016
Aquilegia coerulea
Aquca_063_00016
N
0.848
BGIOSGA023709
Oryza indica
BGIOSGA023709
N
0.909
BGIOSGA025947
Oryza indica
BGIOSGA025947
N
0.889
Bo1g024250
Brassica oleracea
Bo1g024250
N
0.778
Bo3g024640
Brassica oleracea
Bo3g024640
N
0.889
Bo4g058460
Brassica oleracea
Bo4g058460
N
0.879
Bo4g173060
Brassica oleracea
Bo4g173060
N
0.899
Bo7g115560
Brassica oleracea
Bo7g115560
N
0.929
Bo7g115570
Brassica oleracea
Bo7g115570
N
0.929
Bostr.10689s0100
Boechera stricta
Bostr.10689s0100
N
0.788
Bostr.24513s0191
Boechera stricta
Bostr.24513s0191
N
0.889
Bostr.7867s1055
Boechera stricta
Bostr.7867s1055
N
0.929
Bra013535
Brassica rapa
Bra013535
N
0.778
Bra018313
Brassica rapa
Bra018313
N
0.879
Bra021635
Brassica rapa
Bra021635
N
0.899
Bra022801
Brassica rapa
Bra022801
N
0.889
Bra023968
Brassica rapa
Bra023968
N
0.929
BRADI1G17680
Brachypodium distachyon
BRADI1G17680
N
0.909
BRADI1G24720
Brachypodium distachyon
BRADI1G24720
N
0.869
Cagra.0567s0011
Capsella grandiflora
Cagra.0567s0011
N
0.889
Cagra.12385s0007
Capsella grandiflora
Cagra.12385s0007
N
0.838
Cagra.3519s0007
Capsella grandiflora
Cagra.3519s0007
N
0.747
Carubv10004192m.g
Capsella rubella
Carubv10004192m.g
N
0.758
Carubv10004194m.g
Capsella rubella
Carubv10004194m.g
N
0.838
Carubv10022654m.g
Capsella rubella
Carubv10022654m.g
N
0.889
cassava13133.valid.m1
Manihot esculenta
cassava13133.valid.m1
N
0.879
cassava25238.valid.m1
Manihot esculenta
cassava25238.valid.m1
N
0.980
cassava39646.m1
Manihot esculenta
cassava39646.m1
N
0.879
cassava41301.m1
Manihot esculenta
cassava41301.m1
N
0.879
Ca_00244
Cicer arietinum
Ca_00244
N
0.771
Ca_08924
Cicer arietinum
Ca_08924
N
0.879
Ca_15659
Cicer arietinum
Ca_15659
N
0.788
Ca_23185
Cicer arietinum
Ca_23185
N
0.949
Ciclev10000225m.g
Citrus clementina
Ciclev10000225m.g
N
0.909
Ciclev10011039m.g
Citrus clementina
Ciclev10011039m.g
N
0.990
Ciclev10014219m.g
Citrus clementina
Ciclev10014219m.g
N
0.889
Cla008225
Citrullus lanatus
Cla008225
N
0.899
Cla018330
Citrullus lanatus
Cla018330
N
0.949
Cucsa.045980
Cucumis sativus
Cucsa.045980
N
0.899
Cucsa.111990
Cucumis sativus
Cucsa.111990
N
0.737
Cucsa.177010
Cucumis sativus
Cucsa.177010
N
0.949
Eucgr.B04027
Eucalyptus grandis
Eucgr.B04027
N
0.859
Eucgr.E03465
Eucalyptus grandis
Eucgr.E03465
N
0.838
Eucgr.E03467
Eucalyptus grandis
Eucgr.E03467
N
0.717
Eucgr.F02704
Eucalyptus grandis
Eucgr.F02704
N
0.970
Eucgr.L01473
Eucalyptus grandis
Eucgr.L01473
N
0.869
evm.TU.supercontig_0.91
Carica papaya
evm.TU.supercontig_0.91
N
0.970
evm.TU.supercontig_2.296
Carica papaya
evm.TU.supercontig_2.296
N
0.889
F775_30051
Aegilops tauschii
F775_30051
N
0.717
F775_32613
Aegilops tauschii
F775_32613
N
0.909
gene13877-v1.0-hybrid
Fragaria vesca
gene13877-v1.0-hybrid
N
0.970
gene28098-v1.0-hybrid
Fragaria vesca
gene28098-v1.0-hybrid
N
0.909
gene30690-v1.0-hybrid
Fragaria vesca
gene30690-v1.0-hybrid
N
0.838
GLYMA01G32810
Glycine max
GLYMA01G32810
N
0.949
GLYMA02G40280
Glycine max
GLYMA02G40280
N
0.818
GLYMA03G04330
Glycine max
GLYMA03G04330
N
0.949
GLYMA11G31234
Glycine max
GLYMA11G31234
N
0.909
GLYMA13G31970
Glycine max
GLYMA13G31970
N
0.879
GLYMA14G38492
Glycine max
GLYMA14G38492
N
0.828
GLYMA15G07350
Glycine max
GLYMA15G07350
N
0.879
GLYMA18G05840
Glycine max
GLYMA18G05840
N
0.909
Gorai.003G152700
Gossypium raimondii
Gorai.003G152700
N
0.919
Gorai.005G004300
Gossypium raimondii
Gorai.005G004300
N
0.960
Gorai.009G173100
Gossypium raimondii
Gorai.009G173100
N
0.859
Gorai.011G022400
Gossypium raimondii
Gorai.011G022400
N
0.879
Gorai.011G127500
Gossypium raimondii
Gorai.011G127500
N
0.970
GRMZM2G008356
Zea mays
GRMZM2G008356
N
0.879
GRMZM2G158162
Zea mays
GRMZM2G158162
N
0.909
GRMZM2G172621
Zea mays
GRMZM2G172621
N
0.909
GSMUA_Achr4G23790_001
Musa acuminata
GSMUA_Achr4G23790_001
N
0.869
GSMUA_Achr5G27930_001
Musa acuminata
GSMUA_Achr5G27930_001
N
0.899
GSMUA_Achr7G00120_001
Musa acuminata
GSMUA_Achr7G00120_001
N
0.879
GSMUA_Achr8G01750_001
Musa acuminata
GSMUA_Achr8G01750_001
N
0.899
GSMUA_Achr8G03800_001
Musa acuminata
GSMUA_Achr8G03800_001
N
0.889
HSI2
Arabidopsis lyrata
scaffold_401535.1
N
0.879
HSL1
Arabidopsis lyrata
scaffold_700997.1
N
0.838
HSL1
Vitis vinifera
VIT_08s0058g01300
N
0.980
LjSGA_009543.1
Lotus japonicus
LjSGA_009543.1
N
0.848
LjSGA_029833.1
Lotus japonicus
LjSGA_029833.1
N
0.778
LPERR07G16110
Leersia perrieri
LPERR07G16110
N
0.889
LPERR07G23240
Leersia perrieri
LPERR07G23240
N
0.909
Lus10018440.g
Linum usitatissimum
Lus10018440.g
N
0.838
Lus10022741.g
Linum usitatissimum
Lus10022741.g
N
0.939
Lus10025142.g
Linum usitatissimum
Lus10025142.g
N
0.980
MDP0000127640
Malus domestica
MDP0000127640
N
0.909
MDP0000229344
Malus domestica
MDP0000229344
N
0.899
MDP0000267885
Malus domestica
MDP0000267885
N
0.909
MDP0000274788
Malus domestica
MDP0000274788
N
0.707
mgf007363m
Mimulus guttatus
mgf007363m
N
0.960
mgf007846m
Mimulus guttatus
mgf007846m
N
0.828
mgf013365m
Mimulus guttatus
mgf013365m
N
0.838
mgf024907m
Mimulus guttatus
mgf024907m
N
0.818
MLOC_36861
Hordeum vulgare
MLOC_36861
N
0.747
MLOC_4657
Hordeum vulgare
MLOC_4657
N
0.879
MTR_2g011940
Medicago truncatula
MTR_2g011940
N
0.869
MTR_3g467380
Medicago truncatula
MTR_3g467380
N
0.859
MTR_4g028130
Medicago truncatula
MTR_4g028130
N
0.949
MTR_5g075410
Medicago truncatula
MTR_5g075410
N
0.747
OB07G31850
Oryza brachyantha
OB07G31850
N
0.909
OBART07G18780
Oryza barthii
OBART07G18780
N
0.889
OBART07G26400
Oryza barthii
OBART07G26400
N
0.909
OGLUM07G18530
Oryza glumaepatula
OGLUM07G18530
N
0.889
OGLUM07G26430
Oryza glumaepatula
OGLUM07G26430
N
0.909
OLONG_008212
Oryza longistaminata
OLONG_008212
N
0.909
OLONG_013183
Oryza longistaminata
OLONG_013183
N
0.889
OMERI07G15550
Oryza meridionalis
OMERI07G15550
N
0.889
OMERI07G23020
Oryza meridionalis
OMERI07G23020
N
0.909
ONIVA07G17160
Oryza nivara
ONIVA07G17160
N
0.889
ONIVA07G26110
Oryza nivara
ONIVA07G26110
N
0.909
OPUNC07G17640
Oryza punctata
OPUNC07G17640
N
0.889
OPUNC07G24850
Oryza punctata
OPUNC07G24850
N
0.798
orange1.1g002489m.g
Citrus sinensis
orange1.1g002489m.g
N
0.889
orange1.1g002708m.g
Citrus sinensis
orange1.1g002708m.g
N
0.990
orange1.1g039386m.g
Citrus sinensis
orange1.1g039386m.g
N
0.747
ORGLA07G0151800
Oryza glaberrima
ORGLA07G0151800
N
0.889
ORGLA07G0207500
Oryza glaberrima
ORGLA07G0207500
N
0.909
ORUFI07G19520
Oryza rufipogon
ORUFI07G19520
N
0.889
ORUFI07G27410
Oryza rufipogon
ORUFI07G27410
N
0.909
OS07G0563350
Oryza sativa
OS07G0563350
N
0.877
OS07G0679700
Oryza sativa
OS07G0679700
N
0.909
Pavir.Ba00225
Panicum virgatum
Pavir.Ba00225
N
0.899
Pavir.Ba00654
Panicum virgatum
Pavir.Ba00654
N
0.879
Pavir.Bb03074
Panicum virgatum
Pavir.Bb03074
N
0.879
Pavir.Bb03754
Panicum virgatum
Pavir.Bb03754
N
0.899
PDK_20s13009463g004
Phoenix dactylifera
PDK_20s13009463g004
N
0.919
PDK_20s13009466g004
Phoenix dactylifera
PDK_20s13009466g004
N
0.899
PDK_20s1314471g001
Phoenix dactylifera
PDK_20s1314471g001
N
0.783
PDK_20s1455001g004
Phoenix dactylifera
PDK_20s1455001g004
N
0.707
PK04158.1
Cannabis sativa
PK04158.1
N
0.899
PK09020.1
Cannabis sativa
PK09020.1
N
0.899
PK13763.1
Cannabis sativa
PK13763.1
N
0.960
Pm000247
Prunus mume
Pm000247
N
0.909
Pm003031
Prunus mume
Pm003031
N
0.970
Pm009906
Prunus mume
Pm009906
N
0.909
POPTR_0004s03530
Populus trichocarpa
POPTR_0004s03530
N
0.889
POPTR_0006s10880
Populus trichocarpa
POPTR_0006s10880
N
0.980
POPTR_0011s04340
Populus trichocarpa
POPTR_0011s04340
N
0.899
POPTR_0013s15330
Populus trichocarpa
POPTR_0013s15330
N
0.869
POPTR_0016s14350
Populus trichocarpa
POPTR_0016s14350
N
0.980
POPTR_0019s15070
Populus trichocarpa
POPTR_0019s15070
N
0.879
PRUPE_ppa001220mg
Prunus persica
PRUPE_ppa001220mg
N
0.909
PRUPE_ppa001229mg
Prunus persica
PRUPE_ppa001229mg
N
0.909
PRUPE_ppa001234mg
Prunus persica
PRUPE_ppa001234mg
N
0.970
SapurV1A.0028s0060
Salix purpurea
SapurV1A.0028s0060
N
0.889
SapurV1A.0044s0150
Salix purpurea
SapurV1A.0044s0150
N
0.909
SapurV1A.0065s0470
Salix purpurea
SapurV1A.0065s0470
N
0.980
SapurV1A.0215s0260
Salix purpurea
SapurV1A.0215s0260
N
0.869
SapurV1A.0914s0080
Salix purpurea
SapurV1A.0914s0080
N
0.980
SapurV1A.1353s0040
Salix purpurea
SapurV1A.1353s0040
N
0.859
Sb02g036430
Sorghum bicolor
Sb02g036430
N
0.879
Sb02g043000
Sorghum bicolor
Sb02g043000
N
0.909
SELMODRAFT_451626
Selaginella moellendorffii
SELMODRAFT_451626
N
0.848
SELMODRAFT_451631
Selaginella moellendorffii
SELMODRAFT_451631
N
0.848
SELMODRAFT_451634
Selaginella moellendorffii
SELMODRAFT_451634
N
0.747
SELMODRAFT_451635
Selaginella moellendorffii
SELMODRAFT_451635
N
0.747
Si028829m.g
Setaria italica
Si028829m.g
N
0.879
Si028834m.g
Setaria italica
Si028834m.g
N
0.899
Solyc02g079020.2
Solanum lycopersicum
Solyc02g079020.2
N
0.889
Solyc06g082520.2
Solanum lycopersicum
Solyc06g082520.2
N
0.889
Solyc10g075030.1
Solanum lycopersicum
Solyc10g075030.1
N
0.980
TCM_019701
Theobroma cacao
TCM_019701
N
0.960
TCM_029976
Theobroma cacao
TCM_029976
N
0.869
TCM_042290
Theobroma cacao
TCM_042290
N
0.929
Thhalv10016263m.g
Eutrema salsugineum
Thhalv10016263m.g
N
0.879
Thhalv10024481m.g
Eutrema salsugineum
Thhalv10024481m.g
N
0.929
Thhalv10024526m.g
Eutrema salsugineum
Thhalv10024526m.g
N
0.768
Traes_2AS_C4FD8E351
Triticum aestivum
Traes_2AS_C4FD8E351
N
0.879
Traes_2AS_F4CEC9849
Triticum aestivum
Traes_2AS_F4CEC9849
N
0.909
Traes_2BS_5B00A8C50
Triticum aestivum
Traes_2BS_5B00A8C50
N
0.909
Traes_2BS_A61094919
Triticum aestivum
Traes_2BS_A61094919
N
0.879
Traes_2DS_3E4E3BEFC
Triticum aestivum
Traes_2DS_3E4E3BEFC
N
0.879
Traes_2DS_B1C947D2B
Triticum aestivum
Traes_2DS_B1C947D2B
N
0.909
TRIUR3_04238
Triticum urartu
TRIUR3_04238
N
0.909
VAL1
Arabidopsis thaliana
AT2G30470
N
0.869
VAL2
Arabidopsis thaliana
AT4G32010
N
0.838
VAL3
Vitis vinifera
VIT_00s0181g00260
N
0.889
VIT_06s0004g08100
Vitis vinifera
VIT_06s0004g08100
N
0.869