CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000274788
(
Malus domestica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
MDP0000274788
T023666_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000274788
B3
334
416
FEKMLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKVQDSKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLLAGDIG
Links
Other
B3
family TFs
Other
Malus domestica
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g002489m.g
Citrus sinensis
orange1.1g002489m.g
N
0.975
Lus10025142.g
Linum usitatissimum
Lus10025142.g
N
0.850
MLOC_36861
Hordeum vulgare
MLOC_36861
N
0.814
LjSGA_029833.1
Lotus japonicus
LjSGA_029833.1
N
0.811
PDK_20s1314471g001
Phoenix dactylifera
PDK_20s1314471g001
N
0.804
PRUPE_ppa001220mg
Prunus persica
PRUPE_ppa001220mg
N
0.778
Pm009906
Prunus mume
Pm009906
N
0.778
Ciclev10014219m.g
Citrus clementina
Ciclev10014219m.g
N
0.778
PK04158.1
Cannabis sativa
PK04158.1
N
0.778
Cucsa.111990
Cucumis sativus
Cucsa.111990
N
0.772
F775_30051
Aegilops tauschii
F775_30051
N
0.771
POPTR_0004s03530
Populus trichocarpa
POPTR_0004s03530
N
0.768
POPTR_0011s04340
Populus trichocarpa
POPTR_0011s04340
N
0.768
TCM_029976
Theobroma cacao
TCM_029976
N
0.768
Gorai.011G022400
Gossypium raimondii
Gorai.011G022400
N
0.768
Cucsa.045980
Cucumis sativus
Cucsa.045980
N
0.758
Pavir.Ba00654
Panicum virgatum
Pavir.Ba00654
N
0.758
SapurV1A.0044s0150
Salix purpurea
SapurV1A.0044s0150
N
0.758
BRADI1G24720
Brachypodium distachyon
BRADI1G24720
N
0.747
GRMZM2G008356
Zea mays
GRMZM2G008356
N
0.747
Sb02g036430
Sorghum bicolor
Sb02g036430
N
0.747
Si028829m.g
Setaria italica
Si028829m.g
N
0.747
VAL3
Vitis vinifera
VIT_00s0181g00260
N
0.747
cassava39646.m1
Manihot esculenta
cassava39646.m1
N
0.747
cassava41301.m1
Manihot esculenta
cassava41301.m1
N
0.747
Eucgr.L01473
Eucalyptus grandis
Eucgr.L01473
N
0.747
Gorai.009G173100
Gossypium raimondii
Gorai.009G173100
N
0.747
Pavir.Bb03074
Panicum virgatum
Pavir.Bb03074
N
0.747
SapurV1A.0028s0060
Salix purpurea
SapurV1A.0028s0060
N
0.747
Eucgr.E03465
Eucalyptus grandis
Eucgr.E03465
N
0.740
MLOC_4657
Hordeum vulgare
MLOC_4657
N
0.737
Solyc02g079020.2
Solanum lycopersicum
Solyc02g079020.2
N
0.737
Traes_2AS_C4FD8E351
Triticum aestivum
Traes_2AS_C4FD8E351
N
0.737
Traes_2BS_A61094919
Triticum aestivum
Traes_2BS_A61094919
N
0.737
Traes_2DS_3E4E3BEFC
Triticum aestivum
Traes_2DS_3E4E3BEFC
N
0.737
29917.m001969
Ricinus communis
29917.m001969
N
0.737
PK13763.1
Cannabis sativa
PK13763.1
N
0.737
gene30690-v1.0-hybrid
Fragaria vesca
gene30690-v1.0-hybrid
N
0.735
BGIOSGA025947
Oryza indica
BGIOSGA025947
N
0.727
Bo7g115560
Brassica oleracea
Bo7g115560
N
0.727
Bo7g115570
Brassica oleracea
Bo7g115570
N
0.727
Bra023968
Brassica rapa
Bra023968
N
0.727
GLYMA01G32810
Glycine max
GLYMA01G32810
N
0.727
GLYMA03G04330
Glycine max
GLYMA03G04330
N
0.727
LPERR07G16110
Leersia perrieri
LPERR07G16110
N
0.727
MTR_4g028130
Medicago truncatula
MTR_4g028130
N
0.727
OBART07G18780
Oryza barthii
OBART07G18780
N
0.727
OGLUM07G18530
Oryza glumaepatula
OGLUM07G18530
N
0.727
OLONG_013183
Oryza longistaminata
OLONG_013183
N
0.727
OMERI07G15550
Oryza meridionalis
OMERI07G15550
N
0.727
ONIVA07G17160
Oryza nivara
ONIVA07G17160
N
0.727
OPUNC07G17640
Oryza punctata
OPUNC07G17640
N
0.727
ORGLA07G0151800
Oryza glaberrima
ORGLA07G0151800
N
0.727
ORUFI07G19520
Oryza rufipogon
ORUFI07G19520
N
0.727
PRUPE_ppa001234mg
Prunus persica
PRUPE_ppa001234mg
N
0.727
TCM_019701
Theobroma cacao
TCM_019701
N
0.727
HSL1
Vitis vinifera
VIT_08s0058g01300
N
0.727
Ca_23185
Cicer arietinum
Ca_23185
N
0.727
Pm003031
Prunus mume
Pm003031
N
0.727
Bostr.7867s1055
Boechera stricta
Bostr.7867s1055
N
0.727
gene13877-v1.0-hybrid
Fragaria vesca
gene13877-v1.0-hybrid
N
0.727
Thhalv10024481m.g
Eutrema salsugineum
Thhalv10024481m.g
N
0.727
OPUNC07G24850
Oryza punctata
OPUNC07G24850
N
0.725
Ca_00244
Cicer arietinum
Ca_00244
N
0.719
AMTR_s00003p00266720
Amborella trichopoda
AMTR_s00003p00266720
N
0.717
GLYMA13G31970
Glycine max
GLYMA13G31970
N
0.717
GLYMA15G07350
Glycine max
GLYMA15G07350
N
0.717
GSMUA_Achr7G00120_001
Musa acuminata
GSMUA_Achr7G00120_001
N
0.717
GSMUA_Achr8G03800_001
Musa acuminata
GSMUA_Achr8G03800_001
N
0.717
MTR_2g011940
Medicago truncatula
MTR_2g011940
N
0.717
Solyc10g075030.1
Solanum lycopersicum
Solyc10g075030.1
N
0.717
29915.m000469
Ricinus communis
29915.m000469
N
0.717
Ciclev10011039m.g
Citrus clementina
Ciclev10011039m.g
N
0.717
Eucgr.F02704
Eucalyptus grandis
Eucgr.F02704
N
0.717
evm.TU.supercontig_0.91
Carica papaya
evm.TU.supercontig_0.91
N
0.717
Gorai.005G004300
Gossypium raimondii
Gorai.005G004300
N
0.717
orange1.1g002708m.g
Citrus sinensis
orange1.1g002708m.g
N
0.717
PDK_20s13009463g004
Phoenix dactylifera
PDK_20s13009463g004
N
0.717
Aquca_045_00208
Aquilegia coerulea
Aquca_045_00208
N
0.714
Aquca_063_00016
Aquilegia coerulea
Aquca_063_00016
N
0.714
BRADI1G17680
Brachypodium distachyon
BRADI1G17680
N
0.707
GSMUA_Achr4G23790_001
Musa acuminata
GSMUA_Achr4G23790_001
N
0.707
POPTR_0006s10880
Populus trichocarpa
POPTR_0006s10880
N
0.707
POPTR_0016s14350
Populus trichocarpa
POPTR_0016s14350
N
0.707
TCM_042290
Theobroma cacao
TCM_042290
N
0.707
VIT_06s0004g08100
Vitis vinifera
VIT_06s0004g08100
N
0.707
Cla018330
Citrullus lanatus
Cla018330
N
0.707
cassava25238.valid.m1
Manihot esculenta
cassava25238.valid.m1
N
0.707
Cucsa.177010
Cucumis sativus
Cucsa.177010
N
0.707
evm.TU.supercontig_2.296
Carica papaya
evm.TU.supercontig_2.296
N
0.707
Gorai.011G127500
Gossypium raimondii
Gorai.011G127500
N
0.707
Lus10018440.g
Linum usitatissimum
Lus10018440.g
N
0.707
Lus10025226.g
Linum usitatissimum
Lus10025226.g
N
0.707
SapurV1A.0065s0470
Salix purpurea
SapurV1A.0065s0470
N
0.707
SapurV1A.0914s0080
Salix purpurea
SapurV1A.0914s0080
N
0.707
PK09020.1
Cannabis sativa
PK09020.1
N
0.704