CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000288808
(
Malus domestica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
MDP0000288808
T023669_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000288808
B3
110
215
FDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSSNDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGEXGKDRLYIDWRRRP
Links
Other
B3
family TFs
Other
Malus domestica
TFs
209 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_04153
Aegilops tauschii
F775_04153
N
0.733
F775_31255
Aegilops tauschii
F775_31255
N
0.720
AMTR_s00018p00040300
Amborella trichopoda
AMTR_s00018p00040300
N
0.723
AMTR_s00114p00142630
Amborella trichopoda
AMTR_s00114p00142630
I
0.724
Aquca_037_00291
Aquilegia coerulea
Aquca_037_00291
I
0.812
Aquca_072_00063
Aquilegia coerulea
Aquca_072_00063
I
0.703
NGA3
Arabidopsis lyrata
fgenesh2_kg.1__134__AT1G01030.1
N
0.792
fgenesh2_kg.181__3__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.181__3__AT2G46870.1
N
0.792
fgenesh2_kg.4__2914__AT2G46870.1
Arabidopsis lyrata
fgenesh2_kg.4__2914__AT2G46870.1
N
0.792
NGA2
Arabidopsis lyrata
fgenesh2_kg.5__2696__AT3G61970.1
N
0.752
NGA4
Arabidopsis lyrata
scaffold_604140.1
I
0.739
NGA3
Arabidopsis thaliana
AT1G01030
N
0.792
NGA1
Arabidopsis thaliana
AT2G46870
N
0.792
NGA2
Arabidopsis thaliana
AT3G61970
N
0.743
Bostr.13158s0202
Boechera stricta
Bostr.13158s0202
N
0.752
Bostr.25993s0080
Boechera stricta
Bostr.25993s0080
N
0.802
Bostr.5325s0023
Boechera stricta
Bostr.5325s0023
N
0.792
Bostr.7365s0004
Boechera stricta
Bostr.7365s0004
I
0.725
BRADI1G77150
Brachypodium distachyon
BRADI1G77150
N
0.743
BRADI5G19260
Brachypodium distachyon
BRADI5G19260
I
0.782
Bo3g001110
Brassica oleracea
Bo3g001110
N
0.772
Bo3g039420
Brassica oleracea
Bo3g039420
N
0.802
Bo4g006900
Brassica oleracea
Bo4g006900
N
0.782
Bo4g099000
Brassica oleracea
Bo4g099000
N
0.762
Bo4g197410
Brassica oleracea
Bo4g197410
I
0.792
Bo5g002790
Brassica oleracea
Bo5g002790
N
0.782
Bo6g079210
Brassica oleracea
Bo6g079210
N
0.772
Bo8g097490
Brassica oleracea
Bo8g097490
N
0.772
Bra000434
Brassica rapa
Bra000434
N
0.782
Bra003482
Brassica rapa
Bra003482
N
0.752
Bra004501
Brassica rapa
Bra004501
N
0.772
Bra007646
Brassica rapa
Bra007646
N
0.772
Bra014415
Brassica rapa
Bra014415
N
0.772
Bra030497
Brassica rapa
Bra030497
N
0.782
Bra033294
Brassica rapa
Bra033294
N
0.762
Bra040478
Brassica rapa
Bra040478
I
0.810
PK11025.1
Cannabis sativa
PK11025.1
I
0.812
PK21157.1
Cannabis sativa
PK21157.1
I
0.772
Cagra.0050s0013
Capsella grandiflora
Cagra.0050s0013
N
0.792
Cagra.0483s0046
Capsella grandiflora
Cagra.0483s0046
I
0.752
Cagra.1968s0048
Capsella grandiflora
Cagra.1968s0048
N
0.792
Carubv10009540m.g
Capsella rubella
Carubv10009540m.g
N
0.792
Carubv10017696m.g
Capsella rubella
Carubv10017696m.g
I
0.743
Carubv10023656m.g
Capsella rubella
Carubv10023656m.g
N
0.792
evm.TU.supercontig_37.108
Carica papaya
evm.TU.supercontig_37.108
I
0.832
evm.TU.supercontig_57.71
Carica papaya
evm.TU.supercontig_57.71
I
0.832
Ca_01368
Cicer arietinum
Ca_01368
I
0.792
Cla005055
Citrullus lanatus
Cla005055
N
0.755
Cla006845
Citrullus lanatus
Cla006845
I
0.752
Cla014858
Citrullus lanatus
Cla014858
N
0.768
Ciclev10020034m.g
Citrus clementina
Ciclev10020034m.g
I
0.812
Ciclev10020450m.g
Citrus clementina
Ciclev10020450m.g
I
0.812
orange1.1g013565m.g
Citrus sinensis
orange1.1g013565m.g
I
0.812
orange1.1g015743m.g
Citrus sinensis
orange1.1g015743m.g
I
0.812
Cucsa.106780
Cucumis sativus
Cucsa.106780
N
0.778
Cucsa.193290
Cucumis sativus
Cucsa.193290
I
0.752
Cucsa.349830
Cucumis sativus
Cucsa.349830
N
0.752
Eucgr.E01093
Eucalyptus grandis
Eucgr.E01093
I
0.792
Eucgr.L00348
Eucalyptus grandis
Eucgr.L00348
I
0.832
Thhalv10001555m.g
Eutrema salsugineum
Thhalv10001555m.g
N
0.802
Thhalv10006123m.g
Eutrema salsugineum
Thhalv10006123m.g
I
0.762
Thhalv10008068m.g
Eutrema salsugineum
Thhalv10008068m.g
N
0.792
gene01855-v1.0-hybrid
Fragaria vesca
gene01855-v1.0-hybrid
I
0.842
gene18594-v1.0-hybrid
Fragaria vesca
gene18594-v1.0-hybrid
I
0.822
GLYMA03G42301
Glycine max
GLYMA03G42301
I
0.792
GLYMA07G05381
Glycine max
GLYMA07G05381
I
0.822
GLYMA16G01951
Glycine max
GLYMA16G01951
I
0.832
GLYMA19G45090
Glycine max
GLYMA19G45090
I
0.802
Gorai.001G150200
Gossypium raimondii
Gorai.001G150200
I
0.832
Gorai.003G073600
Gossypium raimondii
Gorai.003G073600
I
0.812
Gorai.004G128200
Gossypium raimondii
Gorai.004G128200
N
0.820
Gorai.007G114200
Gossypium raimondii
Gorai.007G114200
I
0.802
Gorai.008G132400
Gossypium raimondii
Gorai.008G132400
I
0.792
Gorai.008G261100
Gossypium raimondii
Gorai.008G261100
I
0.782
MLOC_66387
Hordeum vulgare
MLOC_66387
I
0.782
MLOC_74058
Hordeum vulgare
MLOC_74058
N
0.703
LPERR02G22870
Leersia perrieri
LPERR02G22870
I
0.762
LPERR03G01560
Leersia perrieri
LPERR03G01560
N
0.822
LPERR04G18630
Leersia perrieri
LPERR04G18630
N
0.772
LPERR10G12990
Leersia perrieri
LPERR10G12990
N
0.723
LPERR11G03050
Leersia perrieri
LPERR11G03050
N
0.723
LPERR12G03290
Leersia perrieri
LPERR12G03290
N
0.733
chr1.CM0105.800.nc
Lotus japonicus
chr1.CM0105.800.nc
I
0.812
LjT15D16.50.nc
Lotus japonicus
LjT15D16.50.nc
I
0.812
MDP0000128295
Malus domestica
MDP0000128295
N
0.936
MDP0000138163
Malus domestica
MDP0000138163
N
0.832
cassava29779.valid.m1
Manihot esculenta
cassava29779.valid.m1
I
0.822
cassava36125.valid.m1
Manihot esculenta
cassava36125.valid.m1
I
0.802
cassava39049.m1
Manihot esculenta
cassava39049.m1
I
0.782
MTR_7g117455
Medicago truncatula
MTR_7g117455
I
0.802
MTR_8g023990
Medicago truncatula
MTR_8g023990
I
0.812
mgf023769m
Mimulus guttatus
mgf023769m
N
0.772
GSMUA_Achr1G03600_001
Musa acuminata
GSMUA_Achr1G03600_001
I
0.752
GSMUA_Achr4G26430_001
Musa acuminata
GSMUA_Achr4G26430_001
I
0.782
GSMUA_Achr4G30170_001
Musa acuminata
GSMUA_Achr4G30170_001
N
0.717
GSMUA_Achr5G20340_001
Musa acuminata
GSMUA_Achr5G20340_001
N
0.723
OBART02G28100
Oryza barthii
OBART02G28100
N
0.762
OBART03G01650
Oryza barthii
OBART03G01650
N
0.802
OBART04G22880
Oryza barthii
OBART04G22880
I
0.782
OBART10G17010
Oryza barthii
OBART10G17010
N
0.743
OBART12G03490
Oryza barthii
OBART12G03490
N
0.733
OB02G35380
Oryza brachyantha
OB02G35380
I
0.792
OB03G11610
Oryza brachyantha
OB03G11610
N
0.812
OB10G24100
Oryza brachyantha
OB10G24100
N
0.756
OB12G13420
Oryza brachyantha
OB12G13420
N
0.703
ORGLA02G0241100
Oryza glaberrima
ORGLA02G0241100
N
0.762
ORGLA03G0014300
Oryza glaberrima
ORGLA03G0014300
N
0.802
ORGLA04G0198400
Oryza glaberrima
ORGLA04G0198400
I
0.782
ORGLA10G0119700
Oryza glaberrima
ORGLA10G0119700
N
0.743
ORGLA12G0033700
Oryza glaberrima
ORGLA12G0033700
N
0.733
OGLUM02G28660
Oryza glumaepatula
OGLUM02G28660
N
0.762
OGLUM03G01630
Oryza glumaepatula
OGLUM03G01630
N
0.802
OGLUM04G22780
Oryza glumaepatula
OGLUM04G22780
I
0.782
OGLUM10G17040
Oryza glumaepatula
OGLUM10G17040
N
0.743
OGLUM12G04180
Oryza glumaepatula
OGLUM12G04180
N
0.733
BGIOSGA005835
Oryza indica
BGIOSGA005835
N
0.762
BGIOSGA011738
Oryza indica
BGIOSGA011738
N
0.802
BGIOSGA014498
Oryza indica
BGIOSGA014498
I
0.772
BGIOSGA031489
Oryza indica
BGIOSGA031489
N
0.743
BGIOSGA036599
Oryza indica
BGIOSGA036599
N
0.733
OLONG_010584
Oryza longistaminata
OLONG_010584
I
0.702
OMERI02G27240
Oryza meridionalis
OMERI02G27240
N
0.762
OMERI03G01600
Oryza meridionalis
OMERI03G01600
N
0.802
OMERI10G13480
Oryza meridionalis
OMERI10G13480
N
0.743
OMERI12G01740
Oryza meridionalis
OMERI12G01740
N
0.703
ONIVA02G30750
Oryza nivara
ONIVA02G30750
N
0.802
ONIVA04G22030
Oryza nivara
ONIVA04G22030
I
0.772
ONIVA10G18740
Oryza nivara
ONIVA10G18740
N
0.743
ONIVA12G03130
Oryza nivara
ONIVA12G03130
N
0.733
ONIVA12G15340
Oryza nivara
ONIVA12G15340
N
0.762
OPUNC02G25780
Oryza punctata
OPUNC02G25780
N
0.762
OPUNC03G01540
Oryza punctata
OPUNC03G01540
N
0.802
OPUNC04G20430
Oryza punctata
OPUNC04G20430
I
0.878
OPUNC10G16940
Oryza punctata
OPUNC10G16940
N
0.743
ORUFI02G29620
Oryza rufipogon
ORUFI02G29620
N
0.762
ORUFI04G24570
Oryza rufipogon
ORUFI04G24570
I
0.752
ORUFI10G18030
Oryza rufipogon
ORUFI10G18030
N
0.743
ORUFI12G03970
Oryza rufipogon
ORUFI12G03970
N
0.733
OS02G0683500
Oryza sativa
OS02G0683500
N
0.762
OS03G0120900
Oryza sativa
OS03G0120900
N
0.802
OS04G0581400
Oryza sativa
OS04G0581400
I
0.782
OS10G0537100
Oryza sativa
OS10G0537100
N
0.743
Pavir.Aa00929
Panicum virgatum
Pavir.Aa00929
N
0.723
Pavir.Ga00960
Panicum virgatum
Pavir.Ga00960
N
0.772
Pavir.Ia04549
Panicum virgatum
Pavir.Ia04549
N
0.782
Pavir.Ib00059
Panicum virgatum
Pavir.Ib00059
N
0.782
Pavir.J06582
Panicum virgatum
Pavir.J06582
N
0.703
Pavir.J27608
Panicum virgatum
Pavir.J27608
N
0.779
Pavir.J35382
Panicum virgatum
Pavir.J35382
N
0.703
Pavir.J38226
Panicum virgatum
Pavir.J38226
N
0.772
POPTR_0001s45650
Populus trichocarpa
POPTR_0001s45650
I
0.812
POPTR_0002s18260
Populus trichocarpa
POPTR_0002s18260
N
0.832
POPTR_0011s15270
Populus trichocarpa
POPTR_0011s15270
I
0.822
POPTR_0014s10290
Populus trichocarpa
POPTR_0014s10290
I
0.832
Pm024248
Prunus mume
Pm024248
I
0.832
Pm028725
Prunus mume
Pm028725
N
0.822
PRUPE_ppa015999mg
Prunus persica
PRUPE_ppa015999mg
N
0.822
PRUPE_ppa019131mg
Prunus persica
PRUPE_ppa019131mg
I
0.832
30068.m002615
Ricinus communis
30068.m002615
I
0.772
30076.m004471
Ricinus communis
30076.m004471
I
0.832
SapurV1A.0003s0340
Salix purpurea
SapurV1A.0003s0340
I
0.842
SapurV1A.0162s0420
Salix purpurea
SapurV1A.0162s0420
I
0.832
SapurV1A.0285s0040
Salix purpurea
SapurV1A.0285s0040
I
0.822
SapurV1A.0666s0090
Salix purpurea
SapurV1A.0666s0090
I
0.886
SELMODRAFT_59317
Selaginella moellendorffii
SELMODRAFT_59317
N
0.729
Si010849m.g
Setaria italica
Si010849m.g
N
0.733
Si011823m.g
Setaria italica
Si011823m.g
N
0.762
Si020241m.g
Setaria italica
Si020241m.g
N
0.703
Si027632m.g
Setaria italica
Si027632m.g
N
0.703
Si036864m.g
Setaria italica
Si036864m.g
N
0.792
Si039972m.g
Setaria italica
Si039972m.g
N
0.703
Solyc08g013690.1
Solanum lycopersicum
Solyc08g013690.1
I
0.792
Solyc08g013700.1
Solanum lycopersicum
Solyc08g013700.1
I
0.782
Solyc08g083400.2
Solanum lycopersicum
Solyc08g083400.2
I
0.822
PGSC0003DMG400005856
Solanum tuberosum
PGSC0003DMG400005856
I
0.792
PGSC0003DMG400005857
Solanum tuberosum
PGSC0003DMG400005857
I
0.792
PGSC0003DMG400012222
Solanum tuberosum
PGSC0003DMG400012222
I
0.832
Sb01g030520
Sorghum bicolor
Sb01g030520
N
0.714
Sb01g049150
Sorghum bicolor
Sb01g049150
N
0.782
Sb04g031710
Sorghum bicolor
Sb04g031710
N
0.723
Sb06g026370
Sorghum bicolor
Sb06g026370
N
0.772
Sb08g003550
Sorghum bicolor
Sb08g003550
N
0.743
TCM_005014
Theobroma cacao
TCM_005014
I
0.832
TCM_015590
Theobroma cacao
TCM_015590
I
0.822
TCM_022729
Theobroma cacao
TCM_022729
N
0.707
Traes_1AL_29F610E15
Triticum aestivum
Traes_1AL_29F610E15
N
0.703
Traes_1BL_53C31B54B
Triticum aestivum
Traes_1BL_53C31B54B
I
0.759
Traes_2AL_25382F498
Triticum aestivum
Traes_2AL_25382F498
N
0.727
Traes_2AL_41E2E66D9
Triticum aestivum
Traes_2AL_41E2E66D9
I
0.831
Traes_2BL_439C794F5
Triticum aestivum
Traes_2BL_439C794F5
N
0.762
Traes_2BL_5ECD53274
Triticum aestivum
Traes_2BL_5ECD53274
N
0.707
Traes_2DL_896E50180
Triticum aestivum
Traes_2DL_896E50180
I
0.893
Traes_4BL_D9784B20C1
Triticum aestivum
Traes_4BL_D9784B20C1
N
0.762
Traes_4DL_A83084AC1
Triticum aestivum
Traes_4DL_A83084AC1
N
0.802
Traes_4DL_D0F3E9568
Triticum aestivum
Traes_4DL_D0F3E9568
N
0.782
Traes_6AL_44AA5642C
Triticum aestivum
Traes_6AL_44AA5642C
I
0.782
Traes_6DL_359607E93
Triticum aestivum
Traes_6DL_359607E93
I
0.782
TRIUR3_01515
Triticum urartu
TRIUR3_01515
N
0.774
TRIUR3_06598
Triticum urartu
TRIUR3_06598
N
0.701
TRIUR3_24950
Triticum urartu
TRIUR3_24950
I
0.757
TRIUR3_29732
Triticum urartu
TRIUR3_29732
N
0.743
VIT_02s0025g03000
Vitis vinifera
VIT_02s0025g03000
I
0.832
VIT_15s0048g02370
Vitis vinifera
VIT_15s0048g02370
I
0.812
GRMZM2G018485
Zea mays
GRMZM2G018485
N
0.743
GRMZM2G024948
Zea mays
GRMZM2G024948
N
0.723
GRMZM2G082227
Zea mays
GRMZM2G082227
N
0.772
GRMZM2G098443
Zea mays
GRMZM2G098443
N
0.752
GRMZM2G102059
Zea mays
GRMZM2G102059
N
0.752
GRMZM2G142999
Zea mays
GRMZM2G142999
N
0.727