CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA014299
(
Oryza indica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BGIOSGA014299
T025575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA014299-PA
BED ZF
46
92
SKVWEEYKPIFLNGKVQFAECLYCHNRLSCKDSNGTSHLWRHQKICP
BGIOSGA014299-PA
BED ZF
147
196
SKVWKEFTPVYIEGKLQAADCIHCQKRLSANKFGGRSHLSRHLITCAGRR
Links
Other
BED ZF
family TFs
Other
Oryza indica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA04G0232300
Oryza glaberrima
ORGLA04G0232300
N
1.000
OS04G0628400
Oryza sativa
OS04G0628400
N
1.000
LPERR04G21800
Leersia perrieri
LPERR04G21800
N
0.964
MLOC_21064
Hordeum vulgare
MLOC_21064
N
0.964
OB04G33050
Oryza brachyantha
OB04G33050
N
0.964
BRADI5G22670
Brachypodium distachyon
BRADI5G22670
N
0.940
Traes_2AL_33E725A3F
Triticum aestivum
Traes_2AL_33E725A3F
N
0.931
Traes_2BL_F5E17E76E
Triticum aestivum
Traes_2BL_F5E17E76E
N
0.931
TRIUR3_02642
Triticum urartu
TRIUR3_02642
N
0.931
Sb06g029390
Sorghum bicolor
Sb06g029390
N
0.905
Pavir.Gb00429
Panicum virgatum
Pavir.Gb00429
N
0.884
Si009364m.g
Setaria italica
Si009364m.g
N
0.872
Pavir.Ga00401
Panicum virgatum
Pavir.Ga00401
N
0.872
BGIOSGA028099
Oryza indica
BGIOSGA028099
N
0.721
OPUNC08G04700
Oryza punctata
OPUNC08G04700
N
0.721
ORUFI08G05400
Oryza rufipogon
ORUFI08G05400
N
0.721
OS08G0180500
Oryza sativa
OS08G0180500
N
0.721
ONIVA08G04740
Oryza nivara
ONIVA08G04740
N
0.709