CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA029845
(
Oryza indica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BGIOSGA029845
T025591_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA029845-PA
BED ZF
181
227
SKAWDDFTPIYIDGKVAKAECMHCHQVFVSNSTSGTSSLLKHQSKCN
BGIOSGA029845-PA
BED ZF
442
484
SKVWDDFTPIFIDGKVARAECMHCHRVFNSGTSNLLKHQAKCS
BGIOSGA029845-PA
BED ZF
1108
1154
SKVWDDFTPIYIDGKLARAECMHCHQVFNSNSTNGTSRLLKHQAKCS
Links
Other
BED ZF
family TFs
Other
Oryza indica
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM09G09060
Oryza glumaepatula
OGLUM09G09060
N
0.811
ORUFI09G09260
Oryza rufipogon
ORUFI09G09260
N
0.811
OBART09G08510
Oryza barthii
OBART09G08510
N
0.803