CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI5G22670
(
Brachypodium distachyon
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BRADI5G22670
T025704_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI5G22670.2
BED ZF
43
89
SKVWEEYKPIFLNGKVQFAECLYCHGRLSCKDSNGTSHLWRHQKICP
BRADI5G22670.2
BED ZF
145
200
SKVWKEFTPIYVEGKLQAADCIHCHKRLSANKFGGRSHLSRHLITCPGRRGSGQNH
Links
Other
BED ZF
family TFs
Other
Brachypodium distachyon
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_21064
Hordeum vulgare
MLOC_21064
N
0.942
OB04G33050
Oryza brachyantha
OB04G33050
N
0.942
BGIOSGA014299
Oryza indica
BGIOSGA014299
N
0.940
ORGLA04G0232300
Oryza glaberrima
ORGLA04G0232300
N
0.940
OS04G0628400
Oryza sativa
OS04G0628400
N
0.940
LPERR04G21800
Leersia perrieri
LPERR04G21800
N
0.930
Traes_2AL_33E725A3F
Triticum aestivum
Traes_2AL_33E725A3F
N
0.920
Traes_2BL_F5E17E76E
Triticum aestivum
Traes_2BL_F5E17E76E
N
0.920
TRIUR3_02642
Triticum urartu
TRIUR3_02642
N
0.920
Pavir.Gb00429
Panicum virgatum
Pavir.Gb00429
N
0.919
Si009364m.g
Setaria italica
Si009364m.g
N
0.907
Pavir.Ga00401
Panicum virgatum
Pavir.Ga00401
N
0.907
Sb06g029390
Sorghum bicolor
Sb06g029390
N
0.882
BGIOSGA028099
Oryza indica
BGIOSGA028099
N
0.744
OPUNC08G04700
Oryza punctata
OPUNC08G04700
N
0.744
ORUFI08G05400
Oryza rufipogon
ORUFI08G05400
N
0.744
OS08G0180500
Oryza sativa
OS08G0180500
N
0.744
ONIVA08G04740
Oryza nivara
ONIVA08G04740
N
0.733
Sb07g005045
Sorghum bicolor
Sb07g005045
N
0.733
Si013272m.g
Setaria italica
Si013272m.g
N
0.721
Pavir.Fb00509
Panicum virgatum
Pavir.Fb00509
N
0.709
Pavir.J16563
Panicum virgatum
Pavir.J16563
N
0.709