CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM09G09060
(
Oryza glumaepatula
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OGLUM09G09060
T027081_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM09G09060.1
BED ZF
81
123
SKVWDDFTPIFVDGKVARAECMHCHRVFNSGTSNLLKHQAKCS
OGLUM09G09060.1
BED ZF
795
841
SKAWDDFTPIYIDGKVAKAECMHCHQVFVSNSTSGTSSLLKHQSKCN
OGLUM09G09060.1
BED ZF
1529
1576
SKVWDDFKPIYIDGKVARAECMHCHQILISNSANGTSNLLKHQAKCSP
Links
Other
BED ZF
family TFs
Other
Oryza glumaepatula
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI09G09260
Oryza rufipogon
ORUFI09G09260
N
1.000
OBART09G08510
Oryza barthii
OBART09G08510
N
0.992
BGIOSGA029845
Oryza indica
BGIOSGA029845
N
0.811