CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS08G0180500
(
Oryza sativa
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
OS08G0180500
T027204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS08T0180500-00
BED ZF
35
85
SKVWDEYKPIYVNGVVQSAECRYCHILMSCKGSDGHSNGTSHLWRHQKICR
OS08T0180500-00
BED ZF
134
178
SKVWEEFTPVYVEGRIQGAECLHCHKRLSADKGRSHLNRHTQTCP
Links
Other
BED ZF
family TFs
Other
Oryza sativa
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA028099
Oryza indica
BGIOSGA028099
N
1.000
ORUFI08G05400
Oryza rufipogon
ORUFI08G05400
N
1.000
ONIVA08G04740
Oryza nivara
ONIVA08G04740
N
0.988
OPUNC08G04700
Oryza punctata
OPUNC08G04700
N
0.988
OB08G14980
Oryza brachyantha
OB08G14980
N
0.872
Sb07g005045
Sorghum bicolor
Sb07g005045
N
0.860
Pavir.Fb00509
Panicum virgatum
Pavir.Fb00509
N
0.826
Pavir.J16563
Panicum virgatum
Pavir.J16563
N
0.814
Si013272m.g
Setaria italica
Si013272m.g
N
0.791
BRADI5G22670
Brachypodium distachyon
BRADI5G22670
N
0.744
Traes_4BL_73A9D9B09
Triticum aestivum
Traes_4BL_73A9D9B09
N
0.733
TRIUR3_32574
Triticum urartu
TRIUR3_32574
N
0.733
BGIOSGA014299
Oryza indica
BGIOSGA014299
N
0.721
OB04G33050
Oryza brachyantha
OB04G33050
N
0.721
ORGLA04G0232300
Oryza glaberrima
ORGLA04G0232300
N
0.721
OS04G0628400
Oryza sativa
OS04G0628400
N
0.721
Pavir.Gb00429
Panicum virgatum
Pavir.Gb00429
N
0.721
LPERR04G21800
Leersia perrieri
LPERR04G21800
N
0.709
MLOC_21064
Hordeum vulgare
MLOC_21064
N
0.709
Si009364m.g
Setaria italica
Si009364m.g
N
0.709
Pavir.Ga00401
Panicum virgatum
Pavir.Ga00401
N
0.709
Traes_2AL_33E725A3F
Triticum aestivum
Traes_2AL_33E725A3F
N
0.701
Traes_2BL_F5E17E76E
Triticum aestivum
Traes_2BL_F5E17E76E
N
0.701
TRIUR3_02642
Triticum urartu
TRIUR3_02642
N
0.701