POPTR_0001s40220 (Populus trichocarpa)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 POPTR_0001s40220 T027348_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s40220.1 BED ZF 60 107

Links

Other BED ZF family TFs
Other Populus trichocarpa TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0001s40170 Populus trichocarpa POPTR_0001s40170 N 0.929
POPTR_0007s00640 Populus trichocarpa POPTR_0007s00640 N 0.919
SapurV1A.0599s0080 Salix purpurea SapurV1A.0599s0080 N 0.857
SapurV1A.0623s0050 Salix purpurea SapurV1A.0623s0050 N 0.857
SapurV1A.0885s0040 Salix purpurea SapurV1A.0885s0040 N 0.857
POPTR_0006s13090 Populus trichocarpa POPTR_0006s13090 N 0.854
POPTR_0008s22220 Populus trichocarpa POPTR_0008s22220 N 0.854
SapurV1A.0498s0210 Salix purpurea SapurV1A.0498s0210 N 0.833
SapurV1A.0580s0110 Salix purpurea SapurV1A.0580s0110 N 0.833
XM_002336930.1 Populus trichocarpa POPTR_0001s22360 N 0.829
SapurV1A.0089s0710 Salix purpurea SapurV1A.0089s0710 N 0.829
POPTR_0012s05700 Populus trichocarpa POPTR_0012s05700 N 0.780
SapurV1A.0449s0030 Salix purpurea SapurV1A.0449s0030 N 0.780
SapurV1A.0416s0010 Salix purpurea SapurV1A.0416s0010 N 0.762
SapurV1A.1091s0040 Salix purpurea SapurV1A.1091s0040 N 0.762
POPTR_0001s18450 Populus trichocarpa POPTR_0001s18450 N 0.750