CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si000514m.g
(
Setaria italica
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Si000514m.g
T027647_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000514m
BED ZF
42
84
SLYLKFFDTAPDGKSRICRLCRKSYCMTTATGNLGKHLNNRHP
Links
Other
BED ZF
family TFs
Other
Setaria italica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb03g008300
Sorghum bicolor
Sb03g008300
N
1.000
Pavir.Ea00771
Panicum virgatum
Pavir.Ea00771
N
1.000
Pavir.Eb00818
Panicum virgatum
Pavir.Eb00818
N
1.000
BGIOSGA002631
Oryza indica
BGIOSGA002631
N
0.907
OB01G10840
Oryza brachyantha
OB01G10840
N
0.907
ORGLA01G0007300
Oryza glaberrima
ORGLA01G0007300
N
0.907
OS01G0111400
Oryza sativa
OS01G0111400
N
0.907
Traes_3AS_ACC13CC21
Triticum aestivum
Traes_3AS_ACC13CC21
N
0.860
MLOC_19462
Hordeum vulgare
MLOC_19462
N
0.814
BRADI2G00992
Brachypodium distachyon
BRADI2G00992
N
0.791
POPTR_0012s05580
Populus trichocarpa
POPTR_0012s05580
N
0.721
VIT_17s0000g04250
Vitis vinifera
VIT_17s0000g04250
N
0.721
Ciclev10019100m.g
Citrus clementina
Ciclev10019100m.g
N
0.721
orange1.1g008805m.g
Citrus sinensis
orange1.1g008805m.g
N
0.721
SapurV1A.0851s0040
Salix purpurea
SapurV1A.0851s0040
N
0.721
SapurV1A.3382s0020
Salix purpurea
SapurV1A.3382s0020
N
0.721
PK14806.1
Cannabis sativa
PK14806.1
N
0.721
PDK_20s1489551g002
Phoenix dactylifera
PDK_20s1489551g002
N
0.721