ENSP00000370620-D1 (Bos grunniens)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 ENSP00000370620-D1 T027992_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBED1
M02771_2.00 		Homo sapiens
HTRTCGCGACATR
YATGTCGCGAYAD		 SELEX
Jolma et al.(2013)
ZBED1_1 		0.977 0.977
ZBED1
M04056_2.00 		Homo sapiens
VTRTCGCGAYAT
ATRTCGCGAYAB		 SELEX
Yin et al.(2017)
ZBED1_eDBD_HT-SELEX 		0.977 0.977
ZBED1
M09776_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DREF_01 		0.977 0.977
ZBED1
M04057_2.00 		Homo sapiens
MTRTCGCGAYAK
MTRTCGCGAYAK		 SELEX
Yin et al.(2017)
ZBED1_eDBD_Methyl-HT-SELEX 		0.977 0.977
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000370620-D1 BED ZF 23 72

Links

Other BED ZF family TFs
Other Bos grunniens TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBED1 Bos taurus ENSBTAG00000024641 I 1.000
ENSOARG00000008137 Ovis aries ENSOARG00000008137 I 1.000
ZBED1 Anolis carolinensis ENSACAG00000023513 I 0.977
ENSAMEG00000018666 Ailuropoda melanoleuca ENSAMEG00000018666 I 0.977
ENSAPLG00000011428 Anas platyrhynchos ENSAPLG00000011428 I 0.977
ENSCSAG00000019527 Chlorocebus sabaeus ENSCSAG00000019527 I 0.977
ZBED1 Dasypus novemcinctus ENSDNOG00000012869 I 0.977
ENSFALG00000015033 Ficedula albicollis ENSFALG00000015033 I 0.977
ZBED1 Felis catus ENSFCAG00000012522 I 0.977
ZBED1 Homo sapiens ENSG00000214717 D 0.977
ENSGALG00000028601 Gallus gallus ENSGALG00000028601 I 0.977
ZBED1 Gorilla gorilla ENSGGOG00000011706 I 0.977
ZBED1 Loxodonta africana ENSLAFG00000013332 I 0.977
ZBED1 Meleagris gallopavo ENSMGAG00000015483 I 0.977
ZBED1 Macaca mulatta ENSMMUG00000007514 I 0.977
ENSNLEG00000018727 Nomascus leucogenys ENSNLEG00000018727 I 0.977
ZBED1 Ornithorhynchus anatinus ENSOANG00000010515 I 0.977
ENSPANG00000011132 Papio anubis ENSPANG00000011132 I 0.977
ENSPPYG00000020088 Pongo abelii ENSPPYG00000020088 I 0.977
ENSPSIG00000002047 Pelodiscus sinensis ENSPSIG00000002047 I 0.977
ENSSHAG00000012608 Sarcophilus harrisii ENSSHAG00000012608 I 0.977
Aan_R008132 Calypte anna Aan_R008132 I 0.977
Afo_R005396 Aptenodytes forsteri Afo_R005396 I 0.977
Brh_R008630 Buceros rhinoceros Brh_R008630 I 0.977
Cmyd_10021612 Chelonia mydas Cmyd_10021612 I 0.977
ENSP00000370620 Macaca fascicularis ENSP00000370620 I 0.977
Gfo_R009655 Geospiza fortis Gfo_R009655 I 0.977
Pvit_08935 Pogona vitticeps Pvit_08935 I 0.977
Tal_R000939 Tyto alba Tal_R000939 I 0.977
XP_002933665 Xenopus tropicalis XP_002933665 I 0.977
XP_002941050 Xenopus tropicalis XP_002941050 I 0.977
ENSLOCG00000017415 Lepisosteus oculatus ENSLOCG00000017415 I 0.955
ZBED1 Oryctolagus cuniculus ENSOCUG00000023740 I 0.955
ENSLACG00000011306 Latimeria chalumnae ENSLACG00000011306 I 0.932
ENSONIG00000007347 Oreochromis niloticus ENSONIG00000007347 I 0.886