Thhalv10018229m.g (Eutrema salsugineum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Thhalv10018229m.g T028720_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10018229m BED ZF 23 71

Links

Other BED ZF family TFs
Other Eutrema salsugineum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.886
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.886
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.886
Bo6g110620 Brassica oleracea Bo6g110620 N 0.841
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.791
TCM_001836 Theobroma cacao TCM_001836 N 0.773
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.773
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.773
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.773
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.750
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.750
mgf000829m Mimulus guttatus mgf000829m N 0.750
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.750
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.738
Pm014562 Prunus mume Pm014562 N 0.738
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.738
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.727
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.727
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.727
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.727
PK13949.1 Cannabis sativa PK13949.1 N 0.727