CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10026863m.g
(
Eutrema salsugineum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
Thhalv10026863m.g
T028726_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10026863m
BED ZF
16
58
DVGWEYGTLYNPLNTDKVKCKLCGKEISGGIHRLKQHIAHKKE
Links
Other
BED ZF
family TFs
Other
Eutrema salsugineum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thhalv10002303m.g
Eutrema salsugineum
Thhalv10002303m.g
N
0.762
gene04769-v1.0-hybrid
Fragaria vesca
gene04769-v1.0-hybrid
N
0.714
gene24597-v1.0-hybrid
Fragaria vesca
gene24597-v1.0-hybrid
N
0.707
Thhalv10015876m.g
Eutrema salsugineum
Thhalv10015876m.g
N
0.704